RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 C1orf109Q9NX04 203 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MARCOQ9UEW3 520 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FBXO9Q9UK97 447 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FBXW2Q9UKT8 454 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PSME2Q9UL46 239 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 RAB26Q9ULW5 256 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 DAPP1Q9UN19 280 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FAF1Q9UNN5 650 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 EIF3LQ9Y262 564 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 WBP11Q9Y2W2 641 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 NOSIPQ9Y314 301 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MRPS2Q9Y399 296 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PTRH2Q9Y3E5 179 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 IGLV3-12A0A075B6K2 115 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 A0A0A6YYD5 115 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 C1orf226A1L170 272 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TRIM64BA6NI03 449 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 VSTM2BA6NLU5 285 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TMEM233B4DJY2 109 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TCP11X1B4DZS4 312 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 NPIPB8E9PQR5 432 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 RTCAO00442 366 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 CREG1O75629 220 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 BMP10O95393 424 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ETHE1O95571 254 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 OXSR1O95747 527 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TBX6O95947 436 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 CLPTM1O96005 669 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 LPLP06858 475 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ANXA4P09525 319 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 NR2F6P10588 404 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 PRPS2P11908 318 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 OSMP13725 252 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 LIFP15018 202 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 LBPP18428 481 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 PRDX6P30041 224 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TIA1P31483 386 aaKnown RBP eCLIP5.78□□□□□ -1.484e-12■■■■■ 34.2
SF3B1-209ENST00000479532 BSGP35613 385 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 RPL3P39023 403 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ASMTP46597 345 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 GSSP48637 474 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 EMP2P54851 167 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 LIM2P55344 173 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TMPRSS3P57727 454 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ACTR3P61158 418 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 RPL38P63173 70 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 OLR1P78380 273 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 MAT1AQ00266 395 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TNFRSF17Q02223 184 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 PLP2Q04941 152 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF763Q0D2J5 394 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 STX4Q12846 297 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TRAP1Q12931 704 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SLC13A2Q13183 592 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SERTAD2Q14140 314 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SSPNQ14714 243 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 HEPACAMQ14CZ8 416 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TGIF1Q15583 401 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SYT16Q17RD7 645 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ANKDD1AQ495B1 522 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 VWA2Q5GFL6 755 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF362Q5T0B9 420 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 VASNQ6EMK4 673 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF793Q6ZN11 406 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 QSOX2Q6ZRP7 698 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 FAM47EQ6ZV65 393 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 COX15Q7KZN9 410 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF605Q86T29 641 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 VASH2Q86V25 355 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 GRAMD2AQ8IUY3 354 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 PRSS58Q8IYP2 241 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SLC7A5P1Q8MH63 180 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TMEM132CQ8N3T6 1108 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 AMER3Q8N944 861 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 FAM47BQ8NA70 645 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 FNDC5Q8NAU1 212 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 PCYOX1LQ8NBM8 494 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 RBM15BQ8NDT2 890 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 OR5T3Q8NGG3 340 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 OR2Y1Q8NGV0 311 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 CDC26Q8NHZ8 85 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF420Q8TAQ5 688 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 NRG4Q8WWG1 115 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TANKQ92844 425 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ABTB1Q969K4 478 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 ERP27Q96DN0 273 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 APIPQ96GX9 242 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SLC45A3Q96JT2 553 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 CEP19Q96LK0 163 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 NEURL2Q9BR09 285 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 C20orf27Q9GZN8 174 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 MYLK2Q9H1R3 596 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 TUBB1Q9H4B7 451 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 RPF2Q9H7B2 306 aaKnown RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 MEAF6Q9HAF1 191 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 MIEF1Q9NQG6 463 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 PRTFDC1Q9NRG1 225 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 GIMAP4Q9NUV9 329 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms