RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 TMEFF1Q8IYR6 380 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 DPH1Q9BZG8 443 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 POLR2AP24928 1970 aaKnown RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 C17orf105B2RV13 164 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 M0R129 80 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 RBMXL2O75526 392 aaKnown RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 CSF2P04141 144 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 NPPBP16860 134 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 FAM69BQ5VUD6 431 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 ADIPOR2Q86V24 386 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 MEX3DQ86XN8 651 aaKnown RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 MINDY2Q8NBR6 621 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 DIO2Q92813 273 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 KIAA1143Q96AT1 154 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 TREX2Q9BQ50 279 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 MROQ9BYG7 248 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 LHPPQ9H008 270 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 ACSS1Q9NUB1 689 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 POT1Q9NUX5 634 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 UPB1Q9UBR1 384 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 AASSQ9UDR5 926 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 H0YGG7 62 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 DLGAP1O14490 977 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 CASC3O15234 703 aaKnown RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 GKN3PP0CG01 181 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 CCR2P41597 374 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 STT3AP46977 705 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 PFN3P60673 137 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 ARF3P61204 181 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 ACY1Q03154 408 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 MAP4K2Q12851 820 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 EXOSC7Q15024 291 aaKnown RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF791Q3KP31 576 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 C1orf94Q6P1W5 598 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 CEACAM19Q7Z692 300 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 OR9A4Q8NGU2 314 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 THAP4Q8WY91 577 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 LYSMD1Q96S90 227 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 CHMP1AQ9HD42 196 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-208ENST00000478423 OBP2AQ9NY56 170 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 METTL21EPA6NDL7 271 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 SLITRK5O94991 958 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 S1PR1P21453 382 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 NFATC3Q12968 1075 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 UGT2A3Q6UWM9 527 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 PELI3Q8N2H9 469 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 HORMAD2Q8N7B1 307 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 CDS1Q92903 461 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 PINK1Q9BXM7 581 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 TMEM14AQ9Y6G1 99 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 TRIOBPQ9H2D6 2365 aa13.41□□□□□ -0.26
NPHP4-208ENST00000478423 A0A1B0GVI7 797 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 GPR75O95800 540 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 GRPRP30550 384 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 CPOQ8IVL8 374 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 OR5T3Q8NGG3 340 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 PNPLA2Q96AD5 504 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 CHIAQ9BZP6 476 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 TEX10Q9NXF1 929 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-208ENST00000478423 SLC7A7Q9UM01 511 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 ARAFP10398 606 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 PDSS1Q5T2R2 415 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 FRMPD2BQ6IN97 320 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 CRB3Q9BUF7 120 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 PBX4Q9BYU1 374 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 ENAMQ9NRM1 1142 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 CMAHPQ9Y471 501 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 TRBV2A0A0J9YWF9 115 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 FMO6PO60774 539 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 AIFM1O95831 613 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 ITGA5P08648 1049 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 TFPTP0C1Z6 253 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 POLR2IP36954 125 aaKnown RBP13.4□□□□□ -0.26
NPHP4-208ENST00000478423 GDI2P50395 445 aaKnown RBP13.4□□□□□ -0.26
NPHP4-208ENST00000478423 CCINQ13939 588 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 TOR1AIP2Q8NFQ8 470 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 OR2L3Q8NG85 312 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 TRUB1Q8WWH5 349 aaKnown RBP13.4□□□□□ -0.26
NPHP4-208ENST00000478423 OR1F2PQ96R84 312 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 PKMYT1Q99640 499 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 LRIT1Q9P2V4 623 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 NCDNQ9UBB6 729 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 GRIP1Q9Y3R0 1128 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 CSNK1G3Q9Y6M4 447 aa13.4□□□□□ -0.26
NPHP4-208ENST00000478423 C7orf72A4D263 438 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 BMXP51813 675 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 CTXN1P60606 82 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF45Q02386 682 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM52BQ4KMG9 183 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 HSD17B12Q53GQ0 312 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 LRFN4Q6PJG9 635 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF517Q6ZMY9 492 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-208ENST00000478423 SH2D5Q6ZV89 423 aa13.39□□□□□ -0.27
NPHP4-208ENST00000478423 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms