RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CCZ1P86791 482 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 CDK16Q00536 496 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 PLGLB1Q02325 96 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ID2Q02363 134 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 RGS1Q08116 209 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ADRM1Q16186 407 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SRSF7Q16629 238 aaKnown RBP eCLIP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 PPP1R3AQ16821 1122 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF791Q3KP31 576 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ADPRMQ3LIE5 342 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ACSF3Q4G176 576 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 DCST1Q5T197 706 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 DUPD1Q68J44 220 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 PGM2L1Q6PCE3 622 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 PLXDC2Q6UX71 529 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 CLEC9AQ6UXN8 241 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF793Q6ZN11 406 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ABHD13Q7L211 337 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 KIAA1328Q86T90 577 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SLC22A16Q86VW1 577 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 THOC6Q86W42 341 aaKnown RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SYCE1Q8N0S2 351 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 FAM47BQ8NA70 645 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF721Q8TF20 911 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 FAM222BQ8WU58 562 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SLC5A11Q8WWX8 675 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 RNASE6Q93091 150 aaKnown RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ANKRD9Q96BM1 317 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 FBXL8Q96CD0 374 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 NTNG2Q96CW9 530 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 MS4A6EQ96DS6 147 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 LINGO1Q96FE5 620 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SERPINB12Q96P63 405 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 TIMP4Q99727 224 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 FAM173AQ9BQD7 235 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 HAUS8Q9BT25 410 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 FAM129AQ9BZQ8 928 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 UNKLQ9H9P5 680 aaKnown RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 IL1RL2Q9HB29 575 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ADAP2Q9NPF8 381 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 PRTFDC1Q9NRG1 225 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 IARS2Q9NSE4 1012 aaKnown RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 C20orf96Q9NUD7 363 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 HPF1Q9NWY4 346 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ALKBH4Q9NXW9 302 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 TRMT6Q9UJA5 497 aaKnown RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ACAD8Q9UKU7 415 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 MMACHCQ9Y4U1 282 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 TRRAPQ9Y4A5 3859 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 NUP214P35658 2090 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 TGP01266 2768 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 TRGV5A0A0B4J1U4 118 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SDR42E2A6NKP2 422 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 WASHC1A8K0Z3 465 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 INAFM1C9JVW0 142 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CDC7O00311 574 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 MPPED1O15442 326 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ERI3O43414 337 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 HCN1O60741 890 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 LDB3O75112 727 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 GUCA1CO95843 209 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 EPPINO95925 133 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 FGGP02679 453 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CLPSP04118 112 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 IGKV3-11P04433 115 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 MLNP12872 115 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 HOXB6P17509 224 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 EPORP19235 508 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CD22P20273 847 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 PCSK6P29122 969 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SLCO1A2P46721 670 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SLC6A12P48065 614 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 TRPC1P48995 793 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ASCL1P50553 236 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 LIM2P55344 173 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 HSD17B7P56937 341 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 RAB38P57729 211 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 DCAF7P61962 342 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CRYZQ08257 329 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 ASPHQ12797 758 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 KIF5AQ12840 1032 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 GPS1Q13098 491 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 THOC5Q13769 683 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CSHL1Q14406 222 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CRYMQ14894 314 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SLC10A1Q14973 349 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 RBBP5Q15291 538 aaKnown RBP4.17□□□□□ -1.74
CKS1B-207ENST00000477676 FBXO48Q5FWF7 155 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 PIGGQ5H8A4 983 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 SEL1L2Q5TEA6 688 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 NDUFAF5Q5TEU4 345 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 PRAMEF20Q5VT98 475 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CASC4Q6P4E1 433 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 HSDL2Q6YN16 418 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 RTL4Q6ZR62 310 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 RGS9BPQ6ZS82 235 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 FAM47EQ6ZV65 393 aa4.17□□□□□ -1.74
CKS1B-207ENST00000477676 CAMKMTQ7Z624 323 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms