RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TAGAPQ8N103 731 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 SLC34A3Q8N130 599 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 APOBEC4Q8WW27 367 aaKnown RBP14.95□□□□□ -0.02
VHL-203ENST00000477538 ZNF354BQ96LW1 612 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 LMF1Q96S06 567 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 CDRT15Q96T59 188 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 SPATA9Q9BWV2 254 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 PIF1Q9H611 641 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 GPR83Q9NYM4 423 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 P2RX2Q9UBL9 471 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 TEKT2Q9UIF3 430 aa14.95□□□□□ -0.02
VHL-203ENST00000477538 YARS2Q9Y2Z4 477 aaKnown RBP14.95□□□□□ -0.02
VHL-203ENST00000477538 HEATR5AQ86XA9 2040 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 CACNA1GO43497 2377 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 TMEM247A6NEH6 219 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 FAM220BPB1ANY3 271 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 KCNK2O95069 426 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 AK1P00568 194 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 ARAFP10398 606 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 ABCD3P28288 659 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 SOX11P35716 441 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 PIGAP37287 484 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 MRPS22P82650 360 aaKnown RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 PLCXD2Q0VAA5 305 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 FUT5Q11128 374 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 DECR1Q16698 335 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 CRB2Q5IJ48 1285 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 SAMD4BQ5PRF9 694 aaKnown RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 ACER2Q5QJU3 275 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 DCST2Q5T1A1 773 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 CCNJQ5T5M9 372 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 HEPHL1Q6MZM0 1159 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 NET1Q7Z628 596 aaPredicted RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 YTHDF3Q7Z739 585 aaKnown RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 IFNEQ86WN2 208 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 PTOV1Q86YD1 416 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 PRR22Q8IZ63 422 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 SLC15A4Q8N697 577 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 BCORP1Q8N888 145 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 CHDHQ8NE62 594 aaPredicted RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 SNRNP27Q8WVK2 155 aaKnown RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 TMBIM1Q969X1 311 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 OMA1Q96E52 524 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 ZNF583Q96ND8 569 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 RASL10BQ96S79 203 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 ALG2Q9H553 416 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 TMEM38AQ9H6F2 299 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 A4GALTQ9NPC4 353 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 PACSIN3Q9UKS6 424 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 ZMIZ1Q9ULJ6 1067 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 PRPF19Q9UMS4 504 aaKnown RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 NPFFR2Q9Y5X5 522 aa14.94□□□□□ -0.02
VHL-203ENST00000477538 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.94□□□□□ -0.02
VHL-203ENST00000477538 FREM3P0C091 2139 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 PRAMEF27A3QJZ7 478 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 SLC28A2O43868 658 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ZNF354AO60765 605 aaPredicted RBP14.93□□□□□ -0.02
VHL-203ENST00000477538 DNAJA2O60884 412 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 CEACAM4O75871 244 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 BCHEP06276 602 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 NR2F1P10589 423 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 KRT20P35900 424 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 RFX3P48380 749 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 GSK3BP49841 420 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 SSR4P51571 173 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 HPCAP84074 193 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ADRM1Q16186 407 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 SYPL1Q16563 259 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ZNF630Q2M218 657 aaPredicted RBP14.93□□□□□ -0.02
VHL-203ENST00000477538 ARHGAP11BQ3KRB8 267 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 GPAT3Q53EU6 434 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ABHD17BQ5VST6 288 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 AGAP7PQ5VUJ5 663 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 BORAQ6PGQ7 559 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 FIGNL1Q6PIW4 674 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ZZZ3Q8IYH5 903 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ARHGAP24Q8N264 748 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 RNF148Q8N7C7 305 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 C11orf65Q8NCR3 313 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 FDCSPQ8NFU4 85 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 OR2T12Q8NG77 320 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 NFKBIDQ8NI38 313 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 ASB15Q8WXK1 588 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 MAL2Q969L2 176 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 REXO5Q96IC2 774 aaKnown RBP14.93□□□□□ -0.02
VHL-203ENST00000477538 AGAP4Q96P64 663 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 THTPAQ9BU02 230 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 LRMDAQ9H2I8 198 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 RYDENQ9NUL5 291 aaKnown RBP14.93□□□□□ -0.02
VHL-203ENST00000477538 ABI3Q9P2A4 366 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 GMPR2Q9P2T1 348 aaKnown RBP14.93□□□□□ -0.02
VHL-203ENST00000477538 MRTO4Q9UKD2 239 aaKnown RBP14.93□□□□□ -0.02
VHL-203ENST00000477538 USP22Q9UPT9 525 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 LIPT1Q9Y234 373 aa14.93□□□□□ -0.02
VHL-203ENST00000477538 PRORSD1PA6NEY8 169 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 C5orf58C9J3I9 102 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 REM1O75628 298 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 DNAJC8O75937 253 aaPredicted RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 IGKV1D-16P01601 117 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 TFPTP0C1Z6 253 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms