RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 ETV5P41161 510 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ETV1P50549 477 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ARFIP1P53367 373 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 PPP1CAP62136 330 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 COX10Q12887 443 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 OCLNQ16625 522 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ZNF730Q6ZMV8 503 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SHFQ7M4L6 423 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 TMEM52Q8NDY8 209 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 OR5T3Q8NGG3 340 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 FGF11Q92914 225 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 TM4SF19Q96DZ7 209 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 CCDC59Q9P031 241 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 PCOLCE2Q9UKZ9 415 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ZNF232Q9UNY5 417 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 TCRBV21S2A2A0A5A6 115 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 HOXC4P09017 264 aaPredicted RBP13.17□□□□□ -0.3
UBXN11-214ENST00000475591 SMIM10L1P0DMW3 83 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 TGM4P49221 684 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 RHAGQ02094 409 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 NCF4Q15080 339 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 DUSP5Q16690 384 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 FLYWCH1Q4VC44 716 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 LIPKQ5VXJ0 399 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 PLEKHG7Q6ZR37 379 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 USP30Q70CQ3 517 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 NANOGP1Q8N7R0 232 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 OR4K14Q8NGD5 310 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 FAM3CQ92520 227 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 SMIM10Q96HG1 83 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 POLR2J2Q9GZM3 115 aaKnown RBP13.17□□□□□ -0.3
UBXN11-214ENST00000475591 SAP130Q9H0E3 1048 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 DAPP1Q9UN19 280 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 CTDSP2O14595 271 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 ASNA1O43681 348 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 APBB3O95704 486 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 CCNYL3P0C7X3 344 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 GPR4P46093 362 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 RGS8P57771 180 aaPredicted RBP13.17□□□□□ -0.3
UBXN11-214ENST00000475591 EFNB1P98172 346 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 KIR2DS3Q14952 304 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
UBXN11-214ENST00000475591 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 Q6ZSR6 202 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 OR13H1Q8NG92 308 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 SLC22A18Q96BI1 424 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
UBXN11-214ENST00000475591 RERGLQ9H628 205 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 FBRSQ9HAH7 460 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 ANKHQ9HCJ1 492 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 SCML1Q9UN30 329 aa13.17□□□□□ -0.3
UBXN11-214ENST00000475591 NPIPA5A0A0B4J1W7 369 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
UBXN11-214ENST00000475591 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
UBXN11-214ENST00000475591 NPIPA7E9PJI5 369 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 SYT5O00445 386 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 HCRTR1O43613 425 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 UPK1BO75841 260 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 CTSBP07858 339 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 NPIPA8P0DM63 369 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 ACP2P11117 423 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 GNSP15586 552 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 DBPQ10586 325 aaPredicted RBP13.16□□□□□ -0.3
UBXN11-214ENST00000475591 TRAM2Q15035 370 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 PRAMEF8Q5VWM4 474 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 PRAMEF7Q5VXH5 474 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 STEAP3Q658P3 488 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 TYW3Q6IPR3 259 aaKnown RBP13.16□□□□□ -0.3
UBXN11-214ENST00000475591 PLEKHM3Q6ZWE6 761 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 SLC22A18ASQ8N1D0 253 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 TMEM255BQ8WV15 326 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 ASB12Q8WXK4 309 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 SERINC2Q96SA4 455 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 MND1Q9BWT6 205 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 FBXO34Q9NWN3 711 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 LIPT1Q9Y234 373 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 ZNF443Q9Y2A4 671 aaPredicted RBP13.16□□□□□ -0.3
UBXN11-214ENST00000475591 SPEGQ15772 3267 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 LRRC72A6NJI9 287 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 H0YGG7 62 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 GABRG2P18507 467 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 RPS19P39019 145 aaKnown RBP13.16□□□□□ -0.3
UBXN11-214ENST00000475591 CRYBB2P43320 205 aa13.16□□□□□ -0.3
UBXN11-214ENST00000475591 MAGEA8P43361 318 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms