RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ESRRBO95718 433 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 DRD5P21918 477 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 CRYGSP22914 178 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 GRK2P25098 689 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 DPP4P27487 766 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 TYK2P29597 1187 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 CCKARP32238 428 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 EMDP50402 254 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 SERPINB8P50452 374 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 CORO7P57737 925 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 TRAF3Q13114 568 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 TECRLQ5HYJ1 363 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 RPS27LQ71UM5 84 aaKnown RBP12.65□□□□□ -0.38
CCDC78-209ENST00000474647 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 OR4K17Q8NGC6 315 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 STARD4Q96DR4 205 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 CNRIP1Q96F85 164 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-209ENST00000474647 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-209ENST00000474647 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 FMO2Q99518 471 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 FAIM2Q9BWQ8 316 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 FARSBQ9NSD9 589 aaKnown RBP12.65□□□□□ -0.38
CCDC78-209ENST00000474647 HEY2Q9UBP5 337 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 PSME2Q9UL46 239 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 COL6A5A8TX70 2615 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 MXRA5Q9NR99 2828 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 UQCRHLA0A096LP55 91 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 CCDC189A1A4V9 331 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 C17orf51A8MQB3 221 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 SCO2O43819 266 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 ABCB7O75027 752 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 PDYNP01213 254 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 CRHP06850 196 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 UGT2B10P36537 528 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 VSNL1P62760 191 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 GALNT1Q10472 559 aaPredicted RBP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 RAET1LQ5VY80 246 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 FAM219BQ5XKK7 198 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 METTL2BQ6P1Q9 378 aaKnown RBP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 PRSS57Q6UWY2 283 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 LARP4Q71RC2 724 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 MILR1Q7Z6M3 343 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 PLD6Q8N2A8 252 aaKnown RBP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 OR4F6Q8NGB9 312 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 TRPC4APQ8TEL6 797 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 SELENOMQ8WWX9 145 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 KAT2AQ92830 837 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 EFHD2Q96C19 240 aaPredicted RBP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 SLC35A4Q96G79 324 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 HBEGFQ99075 208 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 SLC39A3Q9BRY0 314 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 NTMT1Q9BV86 223 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 PINK1Q9BXM7 581 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 TSPYL1Q9H0U9 437 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 ZBTB26Q9HCK0 441 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 PPP4R1LQ9P1A2 415 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 PCTPQ9UKL6 214 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 UTS2RQ9UKP6 389 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 NFU1Q9UMS0 254 aa12.64□□□□□ -0.39
CCDC78-209ENST00000474647 GPR55Q9Y2T6 319 aaPredicted RBP12.64□□□□□ -0.39
CCDC78-209ENST00000474647 HMX2A2RU54 273 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 H3BML4 177 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 TO15178 435 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 TSPAN2O60636 221 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 SMIM24O75264 130 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 CNOT4O95628 575 aaKnown RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 ALDOAP04075 364 aaKnown RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 PEPDP12955 493 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 PTH2RP49190 550 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 DSCR4P56555 118 aaPredicted RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 STX5Q13190 355 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 EFR3AQ14156 821 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF628Q5EBL2 1059 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 C10orf62Q5T681 223 aaPredicted RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 ANKRD34AQ69YU3 496 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 PPP4R4Q6NUP7 873 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 CXXC5Q7LFL8 322 aaKnown RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 CCDC116Q8IYX3 515 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 C1orf52Q8N6N3 182 aaKnown RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 GBP7Q8N8V2 638 aaPredicted RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 OR9A2Q8NGT5 310 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 PPP1R14CQ8TAE6 165 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 FIG4Q92562 907 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 EXOSC8Q96B26 276 aaKnown RBP12.63□□□□□ -0.39
CCDC78-209ENST00000474647 TM4SF18Q96CE8 201 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 GPR78Q96P69 363 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 BTBD9Q96Q07 612 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 ELOVL5Q9NYP7 299 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 SENP1Q9P0U3 644 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 XPR1Q9UBH6 696 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 TRPS1Q9UHF7 1281 aa12.63□□□□□ -0.39
CCDC78-209ENST00000474647 B4DXG7 233 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms