RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 GABRA1P14867 456 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 KRT20P35900 424 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 SERPINB4P48594 390 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 EFR3AQ14156 821 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 CEP85LQ5SZL2 805 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 NUDCD3Q8IVD9 361 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 HOMEZQ8IX15 550 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 MCEMP1Q8IX19 187 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 ULK2Q8IYT8 1036 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 WDSUB1Q8N9V3 476 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-203ENST00000474056 OR10Q1Q8NGQ4 319 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 PPCDCQ96CD2 204 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 TIMP4Q99727 224 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 UCK2Q9BZX2 261 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 SH3BP4Q9P0V3 963 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 PCDHGB3Q9Y5G1 929 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 WIF1Q9Y5W5 379 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 ADGRG4Q8IZF6 3080 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 CSMD1Q96PZ7 3565 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 WDR91A4D1P6 747 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 KDM4EB2RXH2 506 aaPredicted RBP16.35■□□□□ 0.21
UPF3A-203ENST00000474056 PEX11AO75192 247 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 ADH7P40394 386 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 FRKP42685 505 aaPredicted RBP16.35■□□□□ 0.21
UPF3A-203ENST00000474056 PNLIPRP2P54317 469 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 PSPHP78330 225 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 PDE7AQ13946 482 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 TNFAIP8L3Q5GJ75 292 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 DCST1Q5T197 706 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 YRDCQ86U90 279 aaKnown RBP16.35■□□□□ 0.21
UPF3A-203ENST00000474056 MED12LQ86YW9 2145 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 LILRB4Q8NHJ6 448 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 RNF138Q8WVD3 245 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 PPP3R2Q96LZ3 170 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 C1orf50Q9BV19 199 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 CENPHQ9H3R5 247 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 SSU72Q9NP77 194 aaKnown RBP16.35■□□□□ 0.21
UPF3A-203ENST00000474056 SERHLQ9NQF3 203 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 CBLCQ9ULV8 474 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 CREBBPQ92793 2442 aa16.35■□□□□ 0.21
UPF3A-203ENST00000474056 A0A0G2JNJ9 132 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 C17orf51A8MQB3 221 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 ITM2AO43736 263 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 IFI6P09912 130 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 CYP4B1P13584 511 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 BMP7P18075 431 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 EFNA1P20827 205 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-203ENST00000474056 GPC1P35052 558 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 PTGER4P35408 488 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 ASMTP46597 345 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 ZFP36L2P47974 494 aaKnown RBP16.34■□□□□ 0.21
UPF3A-203ENST00000474056 GAS1P54826 345 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 TFF3Q07654 80 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 GAB1Q13480 694 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 NHSL2Q5HYW2 709 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 VASNQ6EMK4 673 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 SEM1Q6ZVN7 128 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 PPP1R14CQ8TAE6 165 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 LMF2Q9BU23 707 aaKnown RBP16.34■□□□□ 0.21
UPF3A-203ENST00000474056 UGT2B28Q9BY64 529 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 TRIM8Q9BZR9 551 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 PRDM14Q9GZV8 571 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 ZNF395Q9H8N7 513 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-203ENST00000474056 EQTNQ9NQ60 294 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 FLRT3Q9NZU0 649 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 Q9UFV3 132 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 FBXL2Q9UKC9 423 aa16.34■□□□□ 0.21
UPF3A-203ENST00000474056 B4DXG7 233 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 SCAMP2O15127 329 aaKnown RBP16.33■□□□□ 0.2
UPF3A-203ENST00000474056 CBR3O75828 277 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 TOXO94900 526 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 HOXD4P09016 255 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-203ENST00000474056 MAPK1P28482 360 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 MANFP55145 182 aaKnown RBP16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ZNHIT3Q15649 155 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-203ENST00000474056 CHI3L2Q15782 390 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 CYP27C1Q4G0S4 372 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ATP6AP1LQ52LC2 224 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 PLCZ1Q86YW0 608 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ACBD4Q8NC06 268 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ZFP28Q8NHY6 868 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ABTB1Q969K4 478 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ZBED6CLQ96FA7 236 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-203ENST00000474056 OR2B2Q9GZK3 357 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 ENKD1Q9H0I2 346 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 RUBCNLQ9H714 662 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 Q9N2J8 555 aa16.33■□□□□ 0.2
UPF3A-203ENST00000474056 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 GXYLT2A0PJZ3 443 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 TMEM114B3SHH9 223 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 TM9SF1O15321 606 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 SCO2O43819 266 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 HSPA4LO95757 839 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 SERPINE1P05121 402 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 DHRS4L1P0CG22 281 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 PRPS2P11908 318 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 GRK2P25098 689 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 EVI2BP34910 448 aa16.32■□□□□ 0.2
UPF3A-203ENST00000474056 RFX3P48380 749 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms