RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RTL6Q6ICC9 239 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 SLC30A6Q6NXT4 461 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 FAM111BQ6SJ93 734 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 TMEM64Q6YI46 380 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
HMGN1-211ENST00000471260 NET1Q7Z628 596 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-211ENST00000471260 PM20D2Q8IYS1 436 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 MMP21Q8N119 569 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 RDH11Q8TC12 318 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 STMN2Q93045 179 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 THOC1Q96FV9 657 aaKnown RBP12.36□□□□□ -0.43
HMGN1-211ENST00000471260 APIPQ96GX9 242 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 METTL2AQ96IZ6 378 aaKnown RBP12.36□□□□□ -0.43
HMGN1-211ENST00000471260 LURAP1Q96LR2 239 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 ZNF570Q96NI8 536 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 UBQLN3Q9H347 655 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 DENND2DQ9H6A0 471 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-211ENST00000471260 MID1IP1Q9NPA3 183 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 GIMAP4Q9NUV9 329 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 STX18Q9P2W9 335 aaKnown RBP12.36□□□□□ -0.43
HMGN1-211ENST00000471260 SPRR3Q9UBC9 169 aa12.36□□□□□ -0.43
HMGN1-211ENST00000471260 FRG2CA6NGY1 282 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 TMEM114B3SHH9 223 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 PLIN3O60664 434 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 ABCB7O75027 752 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 CIB2O75838 187 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 SLITRK5O94991 958 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 PROCP04070 461 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 IL3P08700 152 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 MPIP34949 423 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 SOX18P35713 384 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 EMDP50402 254 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 CDK9P50750 372 aaKnown RBP12.35□□□□□ -0.43
HMGN1-211ENST00000471260 HMGCS1Q01581 520 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 DUSP8Q13202 625 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 TAF11Q15544 211 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 SLC25A35Q3KQZ1 300 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 TRMT12Q53H54 448 aaKnown RBP12.35□□□□□ -0.43
HMGN1-211ENST00000471260 ZNF628Q5EBL2 1059 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 NHSL2Q5HYW2 709 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 RIPPLY2Q5TAB7 128 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 FNDC7Q5VTL7 733 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 TIGD3Q6B0B8 471 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 CCDC116Q8IYX3 515 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 CCNYL1Q8N7R7 359 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 ADCY4Q8NFM4 1077 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 OR52R1Q8NGF1 315 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 OR1J4Q8NGS1 313 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 PPP1R14CQ8TAE6 165 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 PIWIL2Q8TC59 973 aaKnown RBP12.35□□□□□ -0.43
HMGN1-211ENST00000471260 C16orf78Q8WTQ4 265 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 ITPAQ9BY32 194 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 UCK2Q9BZX2 261 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 METTL7AQ9H8H3 244 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 SLC35C2Q9NQQ7 365 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 MRGBPQ9NV56 204 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 ALKBH4Q9NXW9 302 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 TNFRSF10DQ9UBN6 386 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 EMCNQ9ULC0 261 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 DTX4Q9Y2E6 619 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 GPR55Q9Y2T6 319 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-211ENST00000471260 TIMM22Q9Y584 194 aa12.35□□□□□ -0.43
HMGN1-211ENST00000471260 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 OR6C70A6NIJ9 312 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 FAM90A27PA6NNH2 459 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 UBFD1O14562 309 aaKnown RBP12.34□□□□□ -0.43
HMGN1-211ENST00000471260 PLOD3O60568 738 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 ANXA4P09525 319 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-211ENST00000471260 PCSK2P16519 638 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 PEX19P40855 299 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 HTR6P50406 440 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 NAGLUP54802 743 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 DUSP2Q05923 314 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 ZNF763Q0D2J5 394 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 PLCXD2Q0VAA5 305 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 BLMHQ13867 455 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 EXOSC7Q15024 291 aaKnown RBP12.34□□□□□ -0.43
HMGN1-211ENST00000471260 HSPB2Q16082 182 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 CFAP157Q5JU67 520 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 FRMD7Q6ZUT3 714 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 TRIM46Q7Z4K8 759 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 CCDC71Q8IV32 467 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-211ENST00000471260 DMRTC2Q8IXT2 367 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-211ENST00000471260 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 PRR22Q8IZ63 422 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 CLYBLQ8N0X4 340 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 JADE3Q92613 823 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 HGDQ93099 445 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 OMA1Q96E52 524 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 GNRHR2Q96P88 292 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 BTBD9Q96Q07 612 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 MCCC2Q9HCC0 563 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms