RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KIAA1024LP59773 190 aa13□□□□□ -0.33
BRAT1-203ENST00000467558 CSNK1G2P78368 415 aa13□□□□□ -0.33
BRAT1-203ENST00000467558 NEIL3Q8TAT5 605 aa13□□□□□ -0.33
BRAT1-203ENST00000467558 HIST1H2AAQ96QV6 131 aa13□□□□□ -0.33
BRAT1-203ENST00000467558 GAL3ST1Q99999 423 aa13□□□□□ -0.33
BRAT1-203ENST00000467558 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
BRAT1-203ENST00000467558 FLRT2O43155 660 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 FRS3O43559 492 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 SBK3P0C264 359 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 PYCR1P32322 319 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 PTGER1P34995 402 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 CDKN2CP42773 168 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ADAM8P78325 824 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 C9orf50Q5SZB4 431 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 NKD1Q969G9 470 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TCTN2Q96GX1 697 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 OR7D2Q96RA2 312 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GFM1Q96RP9 751 aaKnown RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 B3GAT2Q9NPZ5 323 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ABCG2Q9UNQ0 655 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 USP22Q9UPT9 525 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 PCDHGA8Q9Y5G5 932 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 BCAT2O15382 392 aaPredicted RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 AQP9O43315 295 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ACPPP15309 386 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GPX2P18283 190 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GGT2P36268 569 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ZNF45Q02386 682 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 QSOX2Q6ZRP7 698 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 LILRA2Q8N149 483 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TNFAIP8L1Q8WVP5 186 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 CDS1Q92903 461 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 NAT6Q93015 286 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 SLC6A17Q9H1V8 727 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ERVK-19Q9WJR5 959 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 SLITRK5O94991 958 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TSFMP43897 325 aaKnown RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 DCST2Q5T1A1 773 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TMEM236Q5W0B7 351 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 CYHR1Q6ZMK1 362 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 UTS2BQ765I0 119 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 NLRP8Q86W28 1048 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TMEFF1Q8IYR6 380 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 PNLDC1Q8NA58 520 aaKnown RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ACOT11Q8WXI4 607 aaPredicted RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 THAP4Q8WY91 577 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TBC1D20Q96BZ9 403 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TEX10Q9NXF1 929 aaPredicted RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 OR51B4Q9Y5P0 310 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 PLD2O14939 933 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 KCNK5O95279 499 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GNAO1P09471 354 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 ADAM15Q13444 863 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 GPR18Q14330 331 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 FRMPD2BQ6IN97 320 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 TMEM102Q8N9M5 508 aaPredicted RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 PAPD5Q8NDF8 572 aaKnown RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 SRA1Q9HD15 236 aaKnown RBP12.99□□□□□ -0.33
BRAT1-203ENST00000467558 UPB1Q9UBR1 384 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 MMP17Q9ULZ9 603 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 SLC7A7Q9UM01 511 aa12.99□□□□□ -0.33
BRAT1-203ENST00000467558 VSTM2BA6NLU5 285 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 NDUFB2O95178 105 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 PKLRP30613 574 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 NR0B1P51843 470 aaKnown RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 CXCR4P61073 352 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 HNRNPA0Q13151 305 aaKnown RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 MAD2L1BPQ15013 274 aaPredicted RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 NT5DC2Q9H857 520 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 CNIH4Q9P003 139 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 PCDHGB6Q9Y5F9 930 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 A6NHS1 94 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 DLGAP1O14490 977 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ALPLP05186 524 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ITGAMP11215 1152 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 PSKH1P11801 424 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 TSPAN5P62079 268 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 RPS15P62841 145 aaKnown RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 TNFRSF17Q02223 184 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
BRAT1-203ENST00000467558 IQCF1Q8N6M8 205 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 OR1E3Q8WZA6 343 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 KIR3DX1Q9H7L2 352 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ASB6Q9NWX5 421 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ARRB2P32121 409 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 PBX2P40425 430 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ACTA2P62736 377 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 ACTG2P63267 376 aa12.98□□□□□ -0.33
BRAT1-203ENST00000467558 SPATC1Q76KD6 591 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms