RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PNLIPRP2P54317 469 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 PPP2R2AP63151 447 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 GALNT18Q6P9A2 607 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 PAMR1Q6UXH9 720 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 LUZP2Q86TE4 346 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 SLC44A2Q8IWA5 706 aaPredicted RBP17.38■□□□□ 0.37
COL9A3-206ENST00000466532 CDC26Q8NHZ8 85 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 WNT2BQ93097 391 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 EFHD2Q96C19 240 aaPredicted RBP17.38■□□□□ 0.37
COL9A3-206ENST00000466532 INTS12Q96CB8 462 aaKnown RBP17.38■□□□□ 0.37
COL9A3-206ENST00000466532 BBS4Q96RK4 519 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 UCN2Q96RP3 112 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 G6PC3Q9BUM1 346 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 RBM24Q9BX46 236 aaKnown RBP17.38■□□□□ 0.37
COL9A3-206ENST00000466532 MID1IP1Q9NPA3 183 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 TAS2R9Q9NYW1 312 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 OR10H1Q9Y4A9 318 aa17.38■□□□□ 0.37
COL9A3-206ENST00000466532 GSTA1P08263 222 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 PYGBP11216 843 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 KLK2P20151 261 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 GRK2P25098 689 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 CPA2P48052 419 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 C2orf80Q0P641 193 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 ZNF155Q12901 538 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-206ENST00000466532 SPDYAQ5MJ70 313 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 IFT20Q8IY31 132 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 GCNT2Q8N0V5 402 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 OR4N2Q8NGD1 307 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 ACMSDQ8TDX5 336 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 RNF138Q8WVD3 245 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 C11orf24Q96F05 449 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-206ENST00000466532 ALPK1Q96QP1 1244 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 YIPF4Q9BSR8 244 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 SHCBP1LQ9BZQ2 653 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 STMN4Q9H169 189 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-206ENST00000466532 ACBD3Q9H3P7 528 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 GSTO2Q9H4Y5 243 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 SIRT5Q9NXA8 310 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 GALNT8Q9NY28 637 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 PSMC3IPQ9P2W1 217 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-206ENST00000466532 CLCF1Q9UBD9 225 aa17.37■□□□□ 0.37
COL9A3-206ENST00000466532 RPH3AQ9Y2J0 694 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-206ENST00000466532 MRPS18CQ9Y3D5 142 aaKnown RBP17.37■□□□□ 0.37
COL9A3-206ENST00000466532 SERTM1A2A2V5 107 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 PLOD2O00469 737 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 COQ9O75208 318 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 JUNP05412 331 aaKnown RBP17.36■□□□□ 0.37
COL9A3-206ENST00000466532 ZNF708P17019 499 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 DDCP20711 480 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 CHMP24386 653 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 DPP4P27487 766 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 GAS1P54826 345 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 FOXA1P55317 472 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 CLDN18P56856 261 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 MRPS22P82650 360 aaKnown RBP17.36■□□□□ 0.37
COL9A3-206ENST00000466532 ZNF763Q0D2J5 394 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 SH2D4BQ5SQS7 431 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 GRAMD2AQ8IUY3 354 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 CCNYL1Q8N7R7 359 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 OR4K17Q8NGC6 315 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 MIEF1Q9NQG6 463 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 PPP4R1LQ9P1A2 415 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 TBK1Q9UHD2 729 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 DCDC2Q9UHG0 476 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 VPS13CQ709C8 3753 aa17.36■□□□□ 0.37
COL9A3-206ENST00000466532 C17orf51A8MQB3 221 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 MYO1GB0I1T2 1018 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 B4DXG7 233 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 UBFD1O14562 309 aaKnown RBP17.35■□□□□ 0.37
COL9A3-206ENST00000466532 SCO2O43819 266 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 ZIC3O60481 467 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 RAF1P04049 648 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 EVI2BP34910 448 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 NCBP2P52298 156 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL9A3-206ENST00000466532 PSG6Q00889 435 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 GAB1Q13480 694 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 SLC29A2Q14542 456 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 IMPG1Q17R60 797 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 PRSS53Q2L4Q9 553 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 CAMKMTQ7Z624 323 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 MBD6Q96DN6 1003 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 CCDC126Q96EE4 140 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 PIGMQ9H3S5 423 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 EMCNQ9ULC0 261 aa17.35■□□□□ 0.37
COL9A3-206ENST00000466532 HCRTR2O43614 444 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 GOSR1O95249 250 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 ATE1O95260 518 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 FAM153BP0C7A2 387 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 MYL2P10916 166 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 ACANP16112 2415 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 MC3RP41968 323 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 DIO3P55073 304 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 DSCR4P56555 118 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-206ENST00000466532 EEF1A1P68104 462 aaKnown RBP17.34■□□□□ 0.37
COL9A3-206ENST00000466532 FOXD4Q12950 439 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-206ENST00000466532 KEAP1Q14145 624 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 POU4F3Q15319 338 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 FAM153CQ494X1 144 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 EEF1A1P5Q5VTE0 462 aa17.34■□□□□ 0.37
COL9A3-206ENST00000466532 TMEM107Q6UX40 140 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms