RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PVRP15151 417 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 HTR5AP47898 357 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 STK19P49842 368 aaPredicted RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 PEX6Q13608 980 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 EXOSC2Q13868 293 aaKnown RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 RFTN1Q14699 578 aaPredicted RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 ZIC1Q15915 447 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 MS4A13Q5J8X5 152 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 SEL1L2Q5TEA6 688 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 WASH2PQ6VEQ5 465 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 Q7L0L9 218 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 LPCAT2Q7L5N7 544 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 ERICH1Q86X53 443 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 SLC22A18ASQ8N1D0 253 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 ZBTB44Q8NCP5 570 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 NFAM1Q8NET5 270 aaPredicted RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 ART4Q93070 314 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 DNAJA3Q96EY1 480 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 ZBED6CLQ96FA7 236 aaPredicted RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 LPAR2Q9HBW0 351 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 POLD4Q9HCU8 107 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 EPS15L1Q9UBC2 864 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 ATP6V1HQ9UI12 483 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 U3KQV3 271 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 TP53BP1Q12888 1972 aaPredicted RBP3.2□□□□□ -1.9
CLK1-208ENST00000464454 A0A0U1RQV5 110 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 WASHC1A8K0Z3 465 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 K7EPI3 171 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 CHADO15335 359 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 GPRIN2O60269 458 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 SRPX2O60687 465 aaPredicted RBP3.2□□□□□ -1.9
CLK1-208ENST00000464454 KBTBD11O94819 623 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 VENTXO95231 258 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 PRAMEF12O95522 483 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 DIRAS3O95661 229 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 PIGRP01833 764 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 UQCRBP14927 111 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 TNNI3P19429 210 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 PAICSP22234 425 aaKnown RBP3.2□□□□□ -1.9
CLK1-208ENST00000464454 CYP2F1P24903 491 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 CSRP3P50461 194 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 HMGCS2P54868 508 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 NAPAP54920 295 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 ZNF33BQ06732 778 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 RAB35Q15286 201 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 MICAQ29983 383 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 CYBRD1Q53TN4 286 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 PNCKQ6P2M8 343 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 LRRC8BQ6P9F7 803 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 AFTPHQ6ULP2 937 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 BTNL3Q6UXE8 466 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 ZNF600Q6ZNG1 722 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 Q6ZR54 194 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 CEACAM19Q7Z692 300 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 GCNT2Q8N0V5 402 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 TEX9Q8N6V9 391 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 OR6T1Q8NGN1 323 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 ZNF671Q8TAW3 534 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 FNDC8Q8TC99 324 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 TADA1Q96BN2 335 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 ELMO2Q96JJ3 720 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 C1orf147Q96MC9 270 aaPredicted RBP3.2□□□□□ -1.9
CLK1-208ENST00000464454 VSTM2LQ96N03 204 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 COG4Q9H9E3 785 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 LIN28AQ9H9Z2 209 aaKnown RBP3.2□□□□□ -1.9
CLK1-208ENST00000464454 CUTCQ9NTM9 273 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 CLEC5AQ9NY25 188 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 ARMCX1Q9P291 453 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 TP53TG3Q9ULZ0 132 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 KIF3AQ9Y496 699 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 RNF115Q9Y4L5 304 aa3.2□□□□□ -1.9
CLK1-208ENST00000464454 SRRM5B3KS81 715 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 PHF1O43189 567 aaPredicted RBP3.19□□□□□ -1.9
CLK1-208ENST00000464454 SMPD2O60906 423 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 AK1P00568 194 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 HEXBP07686 556 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 WNT2P09544 360 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 THRBP10828 461 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 ADRA1AP35348 466 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 HMGCLP35914 325 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 MDH1P40925 334 aaKnown RBP3.19□□□□□ -1.9
CLK1-208ENST00000464454 PTGFRP43088 359 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 EMDP50402 254 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 OSTNP61366 133 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 LTB4RQ15722 352 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 CDKN3Q16667 212 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 PPP1R3AQ16821 1122 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 DCAF4L1Q3SXM0 396 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 ZNF311Q5JNZ3 666 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 HACD2Q6Y1H2 254 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 PRSS48Q7RTY5 328 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 CBWD2Q8IUF1 395 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 RFESDQ8TAC1 157 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 AGAP11Q8TF27 550 aa3.19□□□□□ -1.9
CLK1-208ENST00000464454 PIWIL1Q96J94 861 aaKnown RBP3.19□□□□□ -1.9
CLK1-208ENST00000464454 MCCC1Q96RQ3 725 aaPredicted RBP3.19□□□□□ -1.9
CLK1-208ENST00000464454 APOL2Q9BQE5 337 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms