RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CCT3P49368 545 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CRISP1P54107 249 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CDC42P60953 191 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CYP4F2P78329 520 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 OLR1P78380 273 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 GNA13Q14344 377 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 PHF19Q5T6S3 580 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 MRM1Q6IN84 353 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 BHLHB9Q6PI77 547 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CCDC103Q8IW40 242 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 C2orf73Q8N5S3 287 aaPredicted RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 SRFBP1Q8NEF9 429 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 GPR32P1Q8NGA4 272 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 GGHQ92820 318 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 UBE2FQ969M7 185 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF354BQ96LW1 612 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 TEFMQ96QE5 360 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 FUZQ9BT04 418 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 B3GNT4Q9C0J1 378 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 KIR3DX1Q9H7L2 352 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 IMP3Q9NV31 184 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 AKAP7Q9P0M2 348 aaPredicted RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 P2RX2Q9UBL9 471 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 AASSQ9UDR5 926 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 ERGIC3Q9Y282 383 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 SH3GLB1Q9Y371 365 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 SNX8Q9Y5X2 465 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CFAP20Q9Y6A4 193 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 AHCTF1Q8WYP5 2266 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CACNA1BQ00975 2339 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 MN1Q10571 1320 aaPredicted RBP9.27□□□□□ -0.92
PTPRD-207ENST00000463477 FEZF1A0PJY2 475 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 J3KTA2 159 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 FFAR1O14842 300 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 B4GALT2O60909 372 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 PFDN1O60925 122 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SULT1C4O75897 302 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 TNFSF15O95150 251 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 JMJD7P0C870 316 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 TYRP1P17643 537 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 PPP2R1BP30154 601 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 NTSP30990 170 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CSTF2P33240 577 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 OPRL1P41146 370 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SSR2P43308 183 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 KHKP50053 298 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CASP9P55211 416 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 LIM2P55344 173 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SNRPGP62308 76 aaKnown RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 ALDH6A1Q02252 535 aaKnown RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CEBPEQ15744 281 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 TMEM201Q5SNT2 666 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 FRMPD2BQ6IN97 320 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 DUS1LQ6P1R4 473 aaKnown RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 C16orf87Q6PH81 154 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 KLHL17Q6TDP4 642 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CD300LDQ6UXZ3 194 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CCDC81Q6ZN84 652 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SLC44A2Q8IWA5 706 aaPredicted RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 AQP11Q8NBQ7 271 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 AGBL5Q8NDL9 886 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 RCBTB1Q8NDN9 531 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 OR9Q2Q8NGE9 314 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 OR52J3Q8NH60 311 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SNIP1Q8TAD8 396 aaKnown RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 BBS10Q8TAM1 723 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 NR4A3Q92570 626 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 LGALS12Q96DT0 336 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 COX4I2Q96KJ9 171 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SLC35G5Q96KT7 338 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CCDC74BQ96LY2 380 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 AMDHD1Q96NU7 426 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 RHNO1Q9BSD3 238 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 DPH7Q9BTV6 452 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SPATA5L1Q9BVQ7 753 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 BTBD2Q9BX70 525 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 CDCA4Q9BXL8 241 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 AICDAQ9GZX7 198 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 TWSG1Q9GZX9 223 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 RACGAP1Q9H0H5 632 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 GLIPR2Q9H4G4 154 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 NMNAT1Q9HAN9 279 aaPredicted RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 MRPS30Q9NP92 439 aaKnown RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SLC35C2Q9NQQ7 365 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 SEMA3GQ9NS98 782 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 IMPAD1Q9NX62 359 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 TEX10Q9NXF1 929 aaPredicted RBP9.27□□□□□ -0.93
PTPRD-207ENST00000463477 OSGIN1Q9UJX0 560 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 TMCC3Q9ULS5 477 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 LOXL2Q9Y4K0 774 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 ZFHX4Q86UP3 3567 aa9.27□□□□□ -0.93
PTPRD-207ENST00000463477 A0A087WV48 116 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 PMS2P1A4D2B8 440 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 M0R082 166 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 TLX3O43711 291 aaPredicted RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 LCKP06239 509 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 H1F0P07305 194 aaKnown RBP9.26□□□□□ -0.93
PTPRD-207ENST00000463477 ANKRD34CP0C6C1 535 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 OSMP13725 252 aa9.26□□□□□ -0.93
PTPRD-207ENST00000463477 CD36P16671 472 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms