RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TIGD3Q6B0B8 471 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 PPP4R4Q6NUP7 873 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 TMEM81Q6P7N7 255 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 ZCCHC12Q6PEW1 402 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 SH2D5Q6ZV89 423 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 WDR53Q7Z5U6 358 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 PLCZ1Q86YW0 608 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 LACC1Q8IV20 430 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 TRIML2Q8N7C3 387 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 NUP43Q8NFH3 380 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 MGARPQ8TDB4 240 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 ABTB1Q969K4 478 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 EFHD2Q96C19 240 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 CTHRC1Q96CG8 243 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 ELP4Q96EB1 424 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 RMND5BQ96G75 393 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 ZNF764Q96H86 408 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 PPP1R36Q96LQ0 422 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 ZNF681Q96N22 645 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 GNRHR2Q96P88 292 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 C1orf50Q9BV19 199 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 SLC6A15Q9H2J7 730 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 GLIPR2Q9H4G4 154 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 PNPLA3Q9NST1 481 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 ZCCHC3Q9NUD5 404 aaKnown RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 TAS2R10Q9NYW0 307 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 EDARQ9UNE0 448 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 C19orf53Q9UNZ5 99 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 GPR55Q9Y2T6 319 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-216ENST00000462421 RAP2CQ9Y3L5 183 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 WIF1Q9Y5W5 379 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 BSNQ9UPA5 3926 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 SCN2AQ99250 2005 aa8.2□□□□□ -1.1
DDX39B-216ENST00000462421 NBASA2RRP1 2371 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 A0A1W2PS29 197 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 NPIPB8E9PQR5 432 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 LINC01387J3KSC0 135 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 PLOD2O00469 737 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 SNPHO15079 494 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 TYROBPO43914 113 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 ICOSLGO75144 302 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 UGT2B11O75310 529 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 TRIM3O75382 744 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-216ENST00000462421 NUDT14O95848 222 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 AGR2O95994 175 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 CLPSP04118 112 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 HPNP05981 417 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 SNRPB2P08579 225 aaKnown RBP8.19□□□□□ -1.1
DDX39B-216ENST00000462421 BCKDHAP12694 445 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 POU3F2P20265 443 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-216ENST00000462421 ME2P23368 584 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 SSTR2P30874 369 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 LCN1P31025 176 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 DCTP40126 519 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 CPA2P48052 419 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 DGKQP52824 942 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 CORO7P57737 925 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 EEF1A1P68104 462 aaKnown RBP8.19□□□□□ -1.1
DDX39B-216ENST00000462421 MYBPHQ13203 477 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 CEBPEQ15744 281 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 DPY19L1Q2PZI1 675 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 PDSS1Q5T2R2 415 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 EEF1A1P5Q5VTE0 462 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 IL23RQ5VWK5 629 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 NXNQ6DKJ4 435 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 ANKRD26P1Q6NSI1 321 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 MISPQ8IVT2 679 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 OR2L13Q8N349 312 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 OR7G2Q8NG99 324 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 GOT1L1Q8NHS2 421 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-216ENST00000462421 RAB3IL1Q8TBN0 382 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 ADAMTS15Q8TE58 950 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 OR5P2Q8WZ92 322 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 SLC35A4Q96G79 324 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 VSTM2LQ96N03 204 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 TRIB1Q96RU8 372 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 HOXD1Q9GZZ0 328 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 FANCFQ9NPI8 374 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 SERHLQ9NQF3 203 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 ATP6V1HQ9UI12 483 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 ZNF639Q9UID6 485 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 EXO1Q9UQ84 846 aaKnown RBP8.19□□□□□ -1.1
DDX39B-216ENST00000462421 PTGDR2Q9Y5Y4 395 aa8.19□□□□□ -1.1
DDX39B-216ENST00000462421 DOCK10Q96BY6 2186 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 TMEM120BA0PK00 339 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 TMEM247A6NEH6 219 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 DUXAA6NLW8 204 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 TMEM233B4DJY2 109 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 UPK1AO00322 258 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 TBX19O60806 448 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 IL33O95760 270 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 LBPP18428 481 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 HK1P19367 917 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 S1PR1P21453 382 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 BGNP21810 368 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 DPP4P27487 766 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 SRD5A2P31213 254 aa8.18□□□□□ -1.1
DDX39B-216ENST00000462421 CHI3L1P36222 383 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms