RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 BNIP3Q12983 259 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZNF846Q147U1 533 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 PLK5Q496M5 336 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 LCN8Q6JVE9 175 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 OGFOD3Q6PK18 319 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 SPPL2CQ8IUH8 684 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 MAML2Q8IZL2 1156 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZNF655Q8N720 491 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 AMER3Q8N944 861 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ACOT4Q8N9L9 421 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 GAL3ST3Q96A11 431 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 ELF4Q99607 663 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 CPPED1Q9BRF8 314 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 KAT8Q9H7Z6 458 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 IL21RQ9HBE5 538 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 PCDHB16Q9NRJ7 776 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 PILRAQ9UKJ1 303 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 KLK4Q9Y5K2 254 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 GSTA4O15217 222 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 HS6ST1O60243 411 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 QDPRP09417 244 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 HOXB9P17482 250 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 ATP5A1P25705 553 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 CERS1P27544 350 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ALDH4A1P30038 563 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 RAB13P51153 203 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 CAPZA1P52907 286 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 TRA2BP62995 288 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 HBA1P69905 142 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 TEKQ02763 1124 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 SLAMF1Q13291 335 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZMYND11Q15326 602 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 RSBN1Q5VWQ0 802 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 FRMPD2BQ6IN97 320 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZNF321PQ8N8H1 164 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 CAMKVQ8NCB2 501 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 OR56B2PQ8NGI1 322 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZCCHC10Q8TBK6 192 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 PNPT1Q8TCS8 783 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 PIGKQ92643 395 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZNF583Q96ND8 569 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 CCDC3Q9BQI4 270 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 FAIM2Q9BWQ8 316 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 SEMA6CQ9H3T2 930 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 RANBP3Q9H6Z4 567 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 PRDM7Q9NQW5 492 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 C5AR2Q9P296 337 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZNF282Q9UDV7 671 aaPredicted RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 MAGEL2Q9UJ55 1249 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ZNF221Q9UK13 617 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 PILRBQ9UKJ0 227 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 HRH3Q9Y5N1 445 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 CACNA1EQ15878 2313 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 DMDP11532 3685 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 LOC105369274A0A096LPK9 316 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 LOC102723532A0A0G2JNH3 316 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 A0A1W2PRB8 838 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TCRBV3S1A0A5B6 114 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ELOVL7A1L3X0 281 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 AQP12BA6NM10 295 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 H0YGG7 62 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 P2RX6O15547 441 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 GPR37L1O60883 481 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 C6orf47O95873 294 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 NTRK1P04629 796 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZNF888P0CJ79 500 aaPredicted RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 CLUP10909 449 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ST6GAL1P15907 406 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ENGP17813 658 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 SLC26A5P58743 744 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ARF3P61204 181 aaPredicted RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 BTN3A2P78410 334 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 SLC14A1Q13336 389 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CYP51A1Q16850 503 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 MPEG1Q2M385 716 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 GLYATQ6IB77 296 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZNF574Q6ZN55 896 aaPredicted RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 C17orf82Q86X59 251 aaPredicted RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 PROSER1Q86XN7 944 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 AQP12AQ8IXF9 295 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 GALNT12Q8IXK2 581 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 OR4N4Q8N0Y3 316 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CYP4Z2PQ8N1L4 340 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZCCHC7Q8N3Z6 543 aaKnown RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 SLC25A45Q8N413 288 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TMEM105Q8N8V8 129 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 NT5CQ8TCD5 201 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 EXOSC8Q96B26 276 aaKnown RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 CHID1Q9BWS9 393 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TPT1P8Q9HAU6 139 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 B3GNT2Q9NY97 397 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 LRIT1Q9P2V4 623 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 FBXW2Q9UKT8 454 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 PMF1-BGLAPU3KQ54 211 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 PI4KAP42356 2102 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 FRYLO94915 3013 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CABIN1Q9Y6J0 2220 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms