RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PLBD1Q6P4A8 553 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 NRARPQ7Z6K4 114 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 ACOT4Q8N9L9 421 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 OR5M3Q8NGP4 307 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 COQ8BQ96D53 544 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 UQCC2Q9BRT2 126 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 SLC5A10A0PJK1 596 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 DAPL1A0PJW8 107 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 B8ZZF3 427 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 FCMRO60667 390 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 ALX3O95076 343 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 IL7P13232 177 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 TNFSF8P32971 234 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 GRK5P34947 590 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 CASP3P42574 277 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 RPL6Q02878 288 aaKnown RBP10.53□□□□□ -0.72
DDR1-240ENST00000454612 MZT2BQ6NZ67 158 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 DPPA4Q7L190 304 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 CHMP1BQ7LBR1 199 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 TMC8Q8IU68 726 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 OR52E1Q8NGJ3 308 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 SPPL3Q8TCT6 385 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 SAMD8Q96LT4 415 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 CAMK1GQ96NX5 476 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 FOXN4Q96NZ1 517 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 ZDHHC5Q9C0B5 715 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 ZNF304Q9HCX3 659 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 ACER3Q9NUN7 267 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 CLDND1Q9NY35 253 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
DDR1-240ENST00000454612 SNX7Q9UNH6 387 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 CFL2Q9Y281 166 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 KCNE3Q9Y6H6 103 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 VWA8A3KMH1 1905 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 PATJQ8NI35 1801 aa10.53□□□□□ -0.72
DDR1-240ENST00000454612 RNASET2O00584 256 aaKnown RBP10.52□□□□□ -0.72
DDR1-240ENST00000454612 SLC16A6O15403 523 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 RUNX3Q13761 415 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 SEC23BQ15437 767 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 FAM111BQ6SJ93 734 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 DEDD2Q8WXF8 326 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 RIT1Q92963 219 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.72
DDR1-240ENST00000454612 GPN2Q9H9Y4 310 aaPredicted RBP10.52□□□□□ -0.72
DDR1-240ENST00000454612 EMC3Q9P0I2 261 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 NLKQ9UBE8 527 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 MAPRE3Q9UPY8 281 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 ASXL3Q9C0F0 2248 aa10.52□□□□□ -0.72
DDR1-240ENST00000454612 A0A075B6Q4 140 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 OR3A3P47888 321 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 ATP12AP54707 1039 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 DEFA5Q01523 94 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 CCDC71Q8IV32 467 aaPredicted RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 CPOQ8IVL8 374 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SMARCD2Q92925 531 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 RBM18Q96H35 190 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 NEDD4LQ96PU5 975 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 MAPKAP1Q9BPZ7 522 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 AIFM2Q9BRQ8 373 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 CDADC1Q9BWV3 514 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 CHIAQ9BZP6 476 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 MMP27Q9H306 513 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SLAMF7Q9NQ25 335 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 NARSO43776 548 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 RAD1O60671 282 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SLC2A10O95528 541 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 LATS1O95835 1130 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 GABRA3P34903 492 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 GCGRP47871 477 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 LIM2P55344 173 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 GABARAPL2P60520 117 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 ZNF91Q05481 1191 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 EIF2B5Q13144 721 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 FADDQ13158 208 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 LARS2Q15031 903 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 SMAD2Q15796 467 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 ACSM5Q6NUN0 579 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 PNCKQ6P2M8 343 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SLC16A12Q6ZSM3 486 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 METTL4Q8N3J2 472 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 TM4SF18Q96CE8 201 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 KCTD7Q96MP8 289 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 GLIPR2Q9H4G4 154 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 NECTIN3Q9NQS3 549 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 SPATA6Q9NWH7 488 aaPredicted RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 HRASLS2Q9NWW9 162 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 IKZF2Q9UKS7 526 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 TPRP12270 2363 aaKnown RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 POM121BA6NF01 834 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 BLOC1S5-TXNDC5H3BN57 136 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 TOXO94900 526 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 KLF8O95600 359 aaPredicted RBP10.52□□□□□ -0.73
DDR1-240ENST00000454612 SPNP16150 400 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 DDCP20711 480 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 KHKP50053 298 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 BTN1A1Q13410 526 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 KCNC3Q14003 757 aa10.52□□□□□ -0.73
DDR1-240ENST00000454612 KEAP1Q14145 624 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms