RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 USP17L15C9J2P7 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 C19orf81C9J6K1 198 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L13C9JLJ4 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L11C9JVI0 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L18D6R9N7 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L22D6RA61 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L17D6RBQ6 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L19D6RCP7 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L20D6RJB6 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GAPDHSO14556 408 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 SIGLEC5O15389 551 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 AMHP03971 560 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CKMP06732 381 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CST2P09228 141 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ALPIP09923 528 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 STAG3L2P0CL84 134 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ALPPL2P10696 532 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FOLR2P14207 255 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ACPPP15309 386 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CPEP16870 476 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PTPRAP18433 802 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 S1PR1P21453 382 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SDHBP21912 280 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GPX3P22352 226 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 AHCYP23526 432 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 YWHAQP27348 245 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 AKT2P31751 481 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CHRNA4P43681 627 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MASP1P48740 699 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DNASE1L1P49184 302 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CSNK1EP49674 416 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC25A11Q02978 314 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L24Q0WX57 530 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 LMAN2Q12907 356 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PLA2G7Q13093 441 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF345Q14585 488 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ALG11Q2TAA5 492 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GXYLT1Q4G148 440 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ABCA11PQ4W5N1 156 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DCAF15Q66K64 600 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CPZQ66K79 652 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DOK6Q6PKX4 331 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 USP17L6PQ6QN14 398 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MAMSTRQ6ZN01 415 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TRMT1LQ7Z2T5 733 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 MAMDC2Q7Z304 686 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 GLT6D1Q7Z4J2 308 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GPR142Q7Z601 462 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TMED4Q7Z7H5 227 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FAM160A2Q8N612 972 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 UBAC2Q8NBM4 344 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC38A9Q8NBW4 561 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF485Q8NCK3 441 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC30A7Q8NEW0 376 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR13C3Q8NGS6 347 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR4L1Q8NH43 312 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR56A3Q8NH54 315 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 OR5R1Q8NH85 324 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FBXO27Q8NI29 283 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SHKBP1Q8TBC3 707 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MZB1Q8WU39 189 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 WNT8BQ93098 351 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 NT5C3BQ969T7 300 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DYNLL2Q96FJ2 89 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZNF354BQ96LW1 612 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PITX2Q99697 317 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SPIN2AQ99865 258 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SPIN2BQ9BPZ2 258 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SLC25A21Q9BQT8 299 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 NIPSNAP3BQ9BS92 247 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 MARVELD1Q9BSK0 173 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 INPP5KQ9BT40 448 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TINAGL1Q9GZM7 467 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 AP5M1Q9H0R1 490 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DUSP21Q9H596 190 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FBRSL1Q9HCM7 1045 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 POLMQ9NP87 494 aaPredicted RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 RNF146Q9NTX7 359 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 DUS2Q9NX74 493 aaKnown RBP2.09□□□□□ -2.07
USP53-202ENST00000450251 TVP23BQ9NYZ1 205 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 LRFN1Q9P244 771 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 P2RX2Q9UBL9 471 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 KLF15Q9UIH9 416 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ZDHHC8Q9ULC8 765 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SH2B3Q9UQQ2 575 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 PCDHB9Q9Y5E1 797 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ROBO2Q9HCK4 1378 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 NPEPPSL1A6NEC2 478 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 GLTPD2A6NH11 291 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 E5RJQ4 531 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 TGFB1I1O43294 461 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 CLIC3O95833 236 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SERPINA5P05154 406 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 RHOP08100 348 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 EBLN1P0CF75 366 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 NR2F1P10589 423 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 ACP2P11117 423 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 COL6A1P12109 1028 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 SPNP16150 400 aa2.09□□□□□ -2.07
USP53-202ENST00000450251 FBLN1P23142 703 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms