RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ITPR3Q14573 2671 aa10.71□□□□□ -0.7
TTC28-203ENST00000442232 MPDZO75970 2070 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 CLCA1A8K7I4 914 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 PLOD3O60568 738 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 GLRA3O75311 464 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 PYGBP11216 843 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 EPXP11678 715 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 DDCP20711 480 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 TCEA1P23193 301 aaKnown RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 CHMP24386 653 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 GRK2P25098 689 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 DPP4P27487 766 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 GCAP28676 217 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 CLK3P49761 638 aaKnown RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 PSMD4P55036 377 aaKnown RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 CORO7P57737 925 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 RAE1P78406 368 aaKnown RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 C2orf80Q0P641 193 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 GAB1Q13480 694 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 CEBPEQ15744 281 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 GALNT18Q6P9A2 607 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 CAMKMTQ7Z624 323 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 LUZP2Q86TE4 346 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 CDC20BQ86Y33 519 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 WDSUB1Q8N9V3 476 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 WNT2BQ93097 391 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 EFHD2Q96C19 240 aaPredicted RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 KCNA7Q96RP8 456 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 ANKRA2Q9H9E1 313 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 Q9N2J8 555 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 RRAGDQ9NQL2 400 aaPredicted RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 DDX18Q9NVP1 670 aaKnown RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 GRID1Q9ULK0 1009 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 RPH3AQ9Y2J0 694 aaPredicted RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 TIMM22Q9Y584 194 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 MED12LQ86YW9 2145 aa10.7□□□□□ -0.7
TTC28-203ENST00000442232 SETD2Q9BYW2 2564 aaPredicted RBP10.7□□□□□ -0.7
TTC28-203ENST00000442232 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 SERTM1A2A2V5 107 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 PLOD2O00469 737 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 CASKO14936 926 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 SCO2O43819 266 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 TSPAN2O60636 221 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 RCBTB2O95199 551 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 RAF1P04049 648 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 JUNP05412 331 aaKnown RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 CT45A8P0DMV1 189 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 CT45A9P0DMV2 189 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 EVI2BP34910 448 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 CPOXP36551 454 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 MC3RP41968 323 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 LHX2P50458 406 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 GFRA1P56159 465 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 DSCR4P56555 118 aaPredicted RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 EEFSECP57772 596 aaKnown RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 KEAP1Q14145 624 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 SLC29A2Q14542 456 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 DAZAP2Q15038 168 aaPredicted RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 DECR1Q16698 335 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 CCDC153Q494R4 210 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 CT45A2Q5DJT8 189 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 RAET1LQ5VY80 246 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 FAM219BQ5XKK7 198 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 OR5M10Q6IEU7 315 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 PAMR1Q6UXH9 720 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 NPSR1Q6W5P4 371 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 ZYG11AQ6WRX3 759 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 GCNT2Q8N0V5 402 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 OR7G2Q8NG99 324 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 FAM76AQ8TAV0 307 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 INTS12Q96CB8 462 aaKnown RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 NTNG2Q96CW9 530 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 ALPK1Q96QP1 1244 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 RHOXF2Q9BQY4 288 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 GSTO2Q9H4Y5 243 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 PTGES2Q9H7Z7 377 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 C3orf14Q9HBI5 128 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 SIRT5Q9NXA8 310 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 FBXL2Q9UKC9 423 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 PACSIN3Q9UKS6 424 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 ABCG2Q9UNQ0 655 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 MRPS18CQ9Y3D5 142 aaKnown RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 POLR3HQ9Y535 204 aaPredicted RBP10.69□□□□□ -0.7
TTC28-203ENST00000442232 ABCA4P78363 2273 aa10.69□□□□□ -0.7
TTC28-203ENST00000442232 A0A087WV62 115 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 FAM221AA4D161 298 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 MYO1GB0I1T2 1018 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 RSL1D1O76021 490 aaKnown RBP10.68□□□□□ -0.7
TTC28-203ENST00000442232 PEPDP12955 493 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 HK1P19367 917 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 SOX18P35713 384 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 CCT5P48643 541 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 STARP49675 285 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 STX5Q13190 355 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 GANABQ14697 944 aaKnown RBP10.68□□□□□ -0.7
TTC28-203ENST00000442232 CYP27C1Q4G0S4 372 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 TMEM107Q6UX40 140 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms