RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CCNYL3P0C7X3 344 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 PCNAP12004 261 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 DRD2P14416 443 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 NPPBP16860 134 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 NELFEP18615 380 aaKnown RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 CCKBRP32239 447 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ETV6P41212 452 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 XCR1P46094 333 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 CD97P48960 835 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ENTPD1P49961 510 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 RAB28P51157 221 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 MVDP53602 400 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TBPL1P62380 186 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 IRF3Q14653 427 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ESPL1Q14674 2120 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 RTP5Q14D33 572 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 NPTX1Q15818 432 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ZIK1Q3SY52 487 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 GTDC1Q4AE62 458 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM35AQ53FP2 167 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 FGD3Q5JSP0 725 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM201Q5SNT2 666 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 WDR74Q6RFH5 385 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 CD300LDQ6UXZ3 194 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 CEACAM20Q6UY09 585 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM64Q6YI46 380 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF551Q7Z340 670 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 SLC44A2Q8IWA5 706 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 RBM12BQ8IXT5 1001 aaKnown RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 NLGN4XQ8N0W4 816 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 KBTBD8Q8NFY9 601 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 NLGN4YQ8NFZ3 816 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 OR4K1Q8NGD4 311 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 OR4A15Q8NGL6 344 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 RHOXF1Q8NHV9 184 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 DYNC2LI1Q8TCX1 351 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 SFXN5Q8TD22 340 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 C16orf78Q8WTQ4 265 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 CHAC2Q8WUX2 184 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF480Q8WV37 535 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 KIAA1143Q96AT1 154 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 C8orf44Q96CB5 159 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 NEURL3Q96EH8 262 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 LIN37Q96GY3 246 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 SH3YL1Q96HL8 342 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 Q96MT0 163 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF578Q96N58 590 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 COL21A1Q96P44 957 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TEFMQ96QE5 360 aaKnown RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 OR2A14Q96R47 310 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 PIP5K1AQ99755 562 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 SPATA5L1Q9BVQ7 753 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 SARGQ9BW04 601 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 CDCA4Q9BXL8 241 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TRIM8Q9BZR9 551 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 TWSG1Q9GZX9 223 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 SP140LQ9H930 580 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF556Q9HAH1 456 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 PDP1Q9P0J1 537 aaPredicted RBP4.46□□□□□ -1.7
EDEM3-203ENST00000439962 OSGIN1Q9UJX0 560 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 PADI1Q9ULC6 663 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 PCDHGA4Q9Y5G9 962 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 LYVE1Q9Y5Y7 322 aa4.46□□□□□ -1.7
EDEM3-203ENST00000439962 ZGRF1Q86YA3 2104 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MED12Q93074 2177 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 LILRA5A6NI73 299 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ARGFXA6NJG6 315 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CLCA1A8K7I4 914 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CDRT15L2A8MXV6 281 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CLIC3O95833 236 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CDK1P06493 297 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 KLK3P07288 261 aaPredicted RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 GAAP10253 952 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 LAMP1P11279 417 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 IL7RP16871 459 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 DDCP20711 480 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 BMXP51813 675 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SNRPGP62308 76 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 VLDLRP98155 873 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 REEP5Q00765 189 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CDC20Q12834 499 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SCARB2Q14108 478 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 HEPACAMQ14CZ8 416 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MINDY4Q4G0A6 757 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 VWA2Q5GFL6 755 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SAXO2Q658L1 398 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 DCDC5Q6ZRR9 648 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PRSS41Q7RTY9 318 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 P3H2Q8IVL5 708 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 RNF175Q8N4F7 328 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 C19orf47Q8N9M1 422 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 KDF1Q8NAX2 398 aaPredicted RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 TANKQ92844 425 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 COL26A1Q96A83 441 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MTFMTQ96DP5 389 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 HBEGFQ99075 208 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 AIF1LQ9BQI0 150 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 BTBD2Q9BX70 525 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms