RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
SMPD4-209ENST00000439886 TSC2P49815 1807 aa11.04□□□□□ -0.64
SMPD4-209ENST00000439886 FFAR1O14842 300 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SRPRAP08240 638 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 MRPL3P09001 348 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ELAVL4P26378 380 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SHC1P29353 583 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 FNTBP49356 437 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 CASP6P55212 293 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 AP1S2P56377 157 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF763Q0D2J5 394 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 PUM1Q14671 1186 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 TSC22D1Q15714 1073 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ARTNQ5T4W7 220 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 HIST2H2AA3Q6FI13 130 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SLC25A25Q6KCM7 469 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 MED27Q6P2C8 311 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 PGBD3Q8N328 593 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 DBF4BQ8NFT6 615 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 OR10H4Q8NGA5 316 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 TMEM163Q8TC26 289 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ATOH1Q92858 354 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 DDOQ99489 341 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SLC12A9Q9BXP2 914 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 RHBGQ9H310 441 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 TRPM5Q9NZQ8 1165 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ENTPD4Q9Y227 616 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ERAL1O75616 437 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 LALBAP00709 142 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 CATP04040 527 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SERPINA4P29622 427 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 TAS2R41P59536 307 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 PFN3P60673 137 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 HSD17B12Q53GQ0 312 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 LAS2Q8IYD9 372 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 MEIOBQ8N635 442 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 HORMAD2Q8N7B1 307 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 GCDHQ92947 438 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ATF6BQ99941 703 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 GSDMCQ9BYG8 508 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 GPR62Q9BZJ7 368 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 OR51V1Q9H2C8 321 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 PRMT8Q9NR22 394 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 FLVCR2Q9UPI3 526 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 LSM2Q9Y333 95 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 TRIM3O75382 744 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 URODP06132 367 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 OR12D1P0DN82 309 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 OR10A3P58181 314 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ACY1Q03154 408 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 RIN1Q13671 783 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 DUSP6Q16828 381 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 FCRLBQ6BAA4 426 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 CD300LGQ6UXG3 332 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 MSANTD1Q6ZTZ1 278 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 MS4A15Q8N5U1 240 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF740Q8NDX6 193 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 OR6M1Q8NGM8 313 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 MYLIPQ8WY64 445 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 NEIL2Q969S2 332 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 CREB3L1Q96BA8 519 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ELP4Q96EB1 424 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SENP5Q96HI0 755 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 WFDC6Q9BQY6 131 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 FUZQ9BT04 418 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 QRSL1Q9H0R6 528 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 LAMP5Q9UJQ1 280 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 CBY1Q9Y3M2 126 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
SMPD4-209ENST00000439886 SPTBP11277 2137 aa11.03□□□□□ -0.64
SMPD4-209ENST00000439886 TMEM202A6NGA9 273 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 GLOD5A6NK44 160 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 SLC38A8A6NNN8 435 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 COCHO43405 550 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 HTR3BO95264 441 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 TCRBP04435 133 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 CPEP16870 476 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 GJA5P36382 358 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 HNMTP50135 292 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 ILKQ13418 452 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 SYPL1Q16563 259 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 TUSC1Q2TAM9 212 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 LGALSLQ3ZCW2 172 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-209ENST00000439886 CDKL4Q5MAI5 379 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 ADGRF1Q5T601 910 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 LDLRAD1Q5T700 205 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 PGBD2Q6P3X8 592 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 TRMT11Q7Z4G4 463 aaKnown RBP11.02□□□□□ -0.64
SMPD4-209ENST00000439886 MOSPD2Q8NHP6 518 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 SMAP2Q8WU79 429 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-209ENST00000439886 SLC38A5Q8WUX1 472 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 UCN3Q969E3 161 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 PTPN18Q99952 460 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 SLC25A19Q9HC21 320 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 NLGN3Q9NZ94 848 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms