RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZER1Q7Z7L7 766 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LINC01465Q8N7H1 131 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 KLHDC9Q8NEP7 349 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 CA10Q9NS85 328 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 FAM120CQ9NX05 1096 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 NTMQ9P121 344 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 SIGLEC6O43699 453 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 SLC25A27O95847 323 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 IGF2P01344 180 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 HLA-DPB1P04440 258 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 WNT1P04628 370 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 UCHL1P09936 223 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 NFYAP23511 347 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 UBE2MP61081 183 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 SNRPGP62308 76 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 GPR33Q49SQ1 333 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 C4orf46Q504U0 113 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 C1orf189Q5VU69 101 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 C18orf63Q68DL7 685 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 TREX2Q9BQ50 279 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 RSPH9Q9H1X1 276 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 SLC32A1Q9H598 525 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 MVB12BQ9H7P6 319 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 PTTG3PQ9NZH4 202 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 OR10H1Q9Y4A9 318 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 CSNK1G3Q9Y6M4 447 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF646O15015 1829 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 RPS2P15880 293 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 STARP49675 285 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 TPBGQ13641 420 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 PAN3Q58A45 887 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LRRN1Q6UXK5 716 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 MRPS24Q96EL2 167 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 WFDC6Q9BQY6 131 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 OR51B5Q9H339 312 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 SLC39A1Q9NY26 324 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ANKRD66B4E2M5 251 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 AIPO00170 330 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 GPR31O00270 319 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ARPC1BO15143 372 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 SMAD9O15198 467 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 CXCL14O95715 111 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 POMCP01189 267 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 HMGN1P05114 100 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 DRD2P14416 443 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 PVALBP20472 110 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 PSMA6P60900 246 aaKnown RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 FGL1Q08830 312 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 PLD1Q13393 1074 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ZXDCQ2QGD7 858 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 HFEQ30201 348 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ARTNQ5T4W7 220 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LILRB2Q8N423 598 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 BBS10Q8TAM1 723 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ADAMTS14Q8WXS8 1223 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 CCDC74AQ96AQ1 378 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 FCRL1Q96LA6 429 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 ORAI3Q9BRQ5 295 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 MED18Q9BUE0 208 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 NKX6-2Q9C056 277 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-202ENST00000435070 THSD1Q9NS62 852 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 CTSFQ9UBX1 484 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 CACNA1CQ13936 2221 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 A0A0G2JMZ2 1700 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 LRRC37AA6NMS7 1700 aa7.04□□□□□ -1.28
CPSF6-202ENST00000435070 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 D6RAR5 112 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ADAM11O75078 769 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 RP2O75695 350 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 GPR1P46091 355 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 MTAPQ13126 283 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 HLXQ14774 488 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TAF13Q15543 124 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 XKR6Q5GH73 641 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ARL9Q6T311 187 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF704Q6ZNC4 412 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ZBTB2Q8N680 514 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 CHTF18Q8WVB6 975 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SPRYD4Q8WW59 207 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 IER2Q9BTL4 223 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 EGLN3Q9H6Z9 239 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ASIC5Q9NY37 505 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 VPS29Q9UBQ0 182 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 CHST2Q9Y4C5 530 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 INSIG1O15503 277 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 OPRD1P41143 372 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 MTNR1AP48039 350 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 GIPRP48546 466 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ILKQ13418 452 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ZNF385BQ569K4 471 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 UBE2R2Q712K3 238 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 POMGNT2Q8NAT1 580 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TRMT10AQ8TBZ6 339 aaKnown RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 NSMAFQ92636 917 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms