RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 Q9N2J8 555 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 ZFP64Q9NPA5 681 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 SDR39U1Q9NRG7 319 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 CBLCQ9ULV8 474 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 OR10H1Q9Y4A9 318 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 PRSS51A0A1B0GVH4 220 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 UBDO15205 165 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 HS6ST1O60243 411 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 EDF1O60869 148 aaKnown RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 STSP08842 583 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ACP2P11117 423 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 CCT3P49368 545 aaKnown RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 IDH3AP50213 366 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 PPIAP62937 165 aaKnown RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 KCNJ2P63252 427 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 EFR3AQ14156 821 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 FAM174BQ3ZCQ3 159 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 VPS26BQ4G0F5 336 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ANXA8L1Q5VT79 327 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 FNDC7Q5VTL7 733 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 GHDCQ8N2G8 530 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ARFGAP2Q8N6H7 521 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 TMEM251Q8N6I4 163 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 GLB1L3Q8NCI6 653 aaPredicted RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 OR56A1Q8NGH5 318 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 OR52N2Q8NGI0 321 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 MED12Q93074 2177 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 MOAP1Q96BY2 351 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 RILPQ96NA2 401 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ADOQ96SZ5 270 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 DOHHQ9BU89 302 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 CCDC28BQ9BUN5 200 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 EQTNQ9NQ60 294 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ZCCHC3Q9NUD5 404 aaKnown RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 GPATCH2Q9NW75 528 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 FAM120CQ9NX05 1096 aaKnown RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 GIN1Q9NXP7 522 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ZIM2Q9NZV7 527 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 BOKQ9UMX3 212 aaPredicted RBP16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ZNF835Q9Y2P0 537 aa16.83■□□□□ 0.28
HLA-F-220ENST00000434407 ACOT7O00154 380 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 IL33O95760 270 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 IGHG3P01860 377 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 HMGN2P05204 90 aaKnown RBP16.82■□□□□ 0.28
HLA-F-220ENST00000434407 GABRA3P34903 492 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 ZFP36L2P47974 494 aaKnown RBP16.82■□□□□ 0.28
HLA-F-220ENST00000434407 PRKAG1P54619 331 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 NME5P56597 212 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 PLGLB1Q02325 96 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.82■□□□□ 0.28
HLA-F-220ENST00000434407 HSP90B2PQ58FF3 399 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 SLC30A6Q6NXT4 461 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 Q6ZPB1 254 aaPredicted RBP16.82■□□□□ 0.28
HLA-F-220ENST00000434407 ACAD11Q709F0 780 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 CLECL1Q8IZS7 167 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 FAM109AQ8N4B1 249 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 SLC16A11Q8NCK7 471 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 GOT1L1Q8NHS2 421 aaPredicted RBP16.82■□□□□ 0.28
HLA-F-220ENST00000434407 PRR7Q8TB68 274 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 FAM110BQ8TC76 370 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 TMCO6Q96DC7 493 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 C16orf58Q96GQ5 468 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 TMEM41AQ96HV5 264 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 EBF4Q9BQW3 602 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 QPCTLQ9NXS2 382 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 SNX8Q9Y5X2 465 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 ICE1Q9Y2F5 2266 aa16.82■□□□□ 0.28
HLA-F-220ENST00000434407 GXYLT2A0PJZ3 443 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 PRAMEF25A6NGN4 478 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 FAM166BA8MTA8 275 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 ADAM10O14672 748 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 ICOSLGO75144 302 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 SLC22A3O75751 556 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 SOX30O94993 753 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 PGRP06401 933 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 RFPL3SP0C7P2 107 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 IL12BP29460 328 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 S100A3P33764 101 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 KRT20P35900 424 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 MAN2A2P49641 1150 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 PRIM2P49643 509 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 AQP5P55064 265 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 MRPS22P82650 360 aaKnown RBP16.81■□□□□ 0.28
HLA-F-220ENST00000434407 DUSP5Q16690 384 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 DECR1Q16698 335 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 CDC73Q6P1J9 531 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 FGD2Q7Z6J4 655 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 VPS37AQ8NEZ2 397 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 EFHD2Q96C19 240 aaPredicted RBP16.81■□□□□ 0.28
HLA-F-220ENST00000434407 MARK4Q96L34 752 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 ZNF597Q96LX8 424 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 CCDC115Q96NT0 180 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 STACQ99469 402 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 UBQLN3Q9H347 655 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 ZNF703Q9H7S9 590 aaPredicted RBP16.81■□□□□ 0.28
HLA-F-220ENST00000434407 METTL7AQ9H8H3 244 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 DUSP22Q9NRW4 184 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 BTNL2Q9UIR0 455 aa16.81■□□□□ 0.28
HLA-F-220ENST00000434407 OSGIN2Q9Y236 505 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms