RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 TOE1Q96GM8 510 aaKnown RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 PRR14Q9BWN1 585 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 SAP130Q9H0E3 1048 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 ZBTB20Q9HC78 741 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 HMG20AQ9NP66 347 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 WSB2Q9NYS7 404 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 MKLN1Q9UL63 735 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF443Q9Y2A4 671 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 CACNA1IQ9P0X4 2223 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 OR5K3A6NET4 321 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 DSCR3O14972 297 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 FRS3O43559 492 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 FGF17O60258 216 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 PLOD3O60568 738 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 CNOT3O75175 753 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 DBTP11182 482 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 TNNI3P19429 210 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 ENDOUP21128 410 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 CSTF2P33240 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF136P52737 540 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 PPP1CAP62136 330 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 EEF1A1P68104 462 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 TSPAN31Q12999 210 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 GINS1Q14691 196 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 SSX1Q16384 188 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 PUS10Q3MIT2 529 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 CASP12Q6UXS9 341 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 USP43Q70EL4 1123 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 CA13Q8N1Q1 262 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 TCEANCQ8N8B7 351 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 OR8D4Q8NGM9 314 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 SDF2Q99470 211 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 MGLLQ99685 303 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 TSSK6Q9BXA6 273 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 OR51E2Q9H255 320 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 PIGUQ9H490 435 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 MTHFD2LQ9H903 347 aaPredicted RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 CTPS2Q9NRF8 586 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 MRPS18AQ9NVS2 196 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 CCDC59Q9P031 241 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 TESQ9UGI8 421 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
HOXC4-202ENST00000430889 SLCO1B1Q9Y6L6 691 aa13.03□□□□□ -0.32
HOXC4-202ENST00000430889 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 CENPVL1A0A0U1RR11 272 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF860A6NHJ4 632 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.32
HOXC4-202ENST00000430889 HCRTR1O43613 425 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 OR5F1O95221 314 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 NTN1O95631 604 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 THBS1P07996 1170 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 THEGLP0DJG4 465 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 POU3F3P20264 500 aaPredicted RBP13.02□□□□□ -0.32
HOXC4-202ENST00000430889 BMP8BP34820 402 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 NUDT1P36639 197 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 TAS2R41P59536 307 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 MLLT1Q03111 559 aaPredicted RBP13.02□□□□□ -0.32
HOXC4-202ENST00000430889 DUSP8Q13202 625 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 DECR1Q16698 335 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 TRMT12Q53H54 448 aaKnown RBP13.02□□□□□ -0.32
HOXC4-202ENST00000430889 SYT14P1Q58G82 188 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 C16orf87Q6PH81 154 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF836Q6ZNA1 936 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 RASSF6Q6ZTQ3 369 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.32
HOXC4-202ENST00000430889 ADCK1Q86TW2 530 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 TMEFF1Q8IYR6 380 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 TDHQ8IZJ6 230 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 POGLUT1Q8NBL1 392 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.32
HOXC4-202ENST00000430889 CTHRC1Q96CG8 243 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 TMEM80Q96HE8 168 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 RACGAP1Q9H0H5 632 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 HHATLQ9HCP6 504 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 C2orf42Q9NWW7 574 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 CYP8B1Q9UNU6 501 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 SATB2Q9UPW6 733 aa13.02□□□□□ -0.32
HOXC4-202ENST00000430889 A0A1W2PPC4 97 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 AGAP5A6NIR3 686 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CPSF4LA6NMK7 179 aaKnown RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 FAM170BA6NMN3 283 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ARHGAP33O14559 1287 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CSO75390 466 aaKnown RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 GPR75O95800 540 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 SCG5P05408 212 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CHRNB1P11230 501 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CLK1P49759 484 aaKnown RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 IFITM3Q01628 133 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ST3GAL3Q11203 375 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms