RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GSTT2P0CG29 244 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 GSTT2BP0CG30 244 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 HLA-EP13747 358 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 GNSP15586 552 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 NR1D1P20393 614 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 M6PRP20645 277 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CA4P22748 312 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 DGKAP23743 735 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ADSSP30520 456 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 SSTR1P30872 391 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 OR1D2P34982 312 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CAMLGP49069 296 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 FMO5P49326 533 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 NUMBP49757 651 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 FUT6P51993 359 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 UCNP55089 124 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CLDN17P56750 224 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ITGA9Q13797 1035 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 DMC1Q14565 340 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 OPCMLQ14982 345 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZCWPW2Q504Y3 356 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZC2HC1CQ53FD0 456 aaPredicted RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 PHLDA2Q53GA4 152 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 PDSS1Q5T2R2 415 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TPGS2Q68CL5 300 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 OR52E8Q6IFG1 317 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 C8orf74Q6P047 294 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 UNQ6126/PRO20091Q6UXV3 157 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZNF589Q86UQ0 364 aaPredicted RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CROCCP3Q8IVE0 287 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 NAXDQ8IW45 347 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 KIRREL3Q8IZU9 778 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 METTL27Q8N6F8 245 aaPredicted RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ARFGAP2Q8N6H7 521 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TRIML2Q8N7C3 387 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZNF441Q8N8Z8 693 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CCNYQ8ND76 341 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TMEM185AQ8NFB2 350 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZNF461Q8TAF7 563 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ANKRD36BP1Q96IX9 119 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 B3GALT6Q96L58 329 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CNOT6LQ96LI5 555 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 PSKH2Q96QS6 385 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 URM1Q9BTM9 101 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TRAF4Q9BUZ4 470 aaPredicted RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TEKT3Q9BXF9 490 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 NSRP1Q9H0G5 558 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 GBA3Q9H227 469 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 RIMS4Q9H426 269 aaPredicted RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CLSTN2Q9H4D0 955 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 RNF121Q9H920 327 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ZCCHC3Q9NUD5 404 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 OCIAD1Q9NX40 245 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 PTTG2Q9NZH5 202 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TEKT2Q9UIF3 430 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 ERVK-19Q9WJR5 959 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 MRPS2Q9Y399 296 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 HELZ2Q9BYK8 2649 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CELSR3Q9NYQ7 3312 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 MTCL1Q9Y4B5 1905 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 LOC105371267A0A1B0GV96 52 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 A0A1B0GVL5 298 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 SMIM31A0A1B0GVY4 71 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CD8B2A6NJW9 211 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 KPNA7A9QM74 516 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 TMEM114B3SHH9 223 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 GOLGA8MH3BSY2 632 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 K7EPI3 171 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 ANGPT2O15123 496 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CLDN3O15551 220 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CHMP2AO43633 222 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 SLC28A2O43868 658 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 SUPT3HO75486 399 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 OR6A2O95222 327 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 LCA5LO95447 670 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 TGFAP01135 160 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 SFTPBP07988 381 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CTRB1P17538 263 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 UGT1A6P19224 532 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 IL32P24001 234 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 EPHA2P29317 976 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 HMOX2P30519 316 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 HSPA9P38646 679 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CDKN1AP38936 164 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 NSFP46459 744 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CSRP3P50461 194 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 CNN1P51911 297 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 HNRNPFP52597 415 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 SMSP52788 366 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 BLVRAP53004 296 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 C21orf58P58505 322 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 DSTNP60981 165 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 SRP54P61011 504 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 POLR2FP61218 127 aaKnown RBP3.66□□□□□ -1.82
HMGB3-203ENST00000430118 VSNL1P62760 191 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 KCNJ10P78508 379 aa3.66□□□□□ -1.82
HMGB3-203ENST00000430118 DMP1Q13316 513 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms