RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MSCO60682 206 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 DIRAS1O95057 198 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 OTCP00480 354 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 THP07101 528 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TFPIP10646 304 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 PTPN3P26045 913 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ARL4AP40617 200 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TNFSF9P41273 254 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 NPBWR1P48145 328 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CCR9P51686 369 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC7A9P82251 487 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MEF2AQ02078 507 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 PTGR1Q14914 329 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR6B2Q6IFH4 312 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 LYPD4Q6UWN0 246 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 LAPTM4BQ86VI4 370 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR5M3Q8NGP4 307 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR10Q1Q8NGQ4 319 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 S100PBPQ96BU1 408 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 LRIG1Q96JA1 1093 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZFP42Q96MM3 310 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF558Q96NG5 402 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 FEVQ99581 238 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MRPL45Q9BRJ2 306 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ADAT1Q9BUB4 502 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 NFKBIL1Q9UBC1 381 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MMACHCQ9Y4U1 282 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM184BQ9Y519 407 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 KCTD3Q9Y597 815 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A1W2PPC1 479 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PRR23D1E9PI22 279 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 HAS3O00219 553 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ARPC5O15511 151 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 MBTPS2O43462 519 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 FADS1O60427 444 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 SOD1P00441 154 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PRR23D2P0DMB1 279 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF14P17017 642 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ELK1P19419 428 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PITPNBP48739 271 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 HTRA4P83105 476 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 GAGE1Q13065 139 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TPBGQ13641 420 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 INPP5JQ15735 1006 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 MAJINQ3KP22 176 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZSCAN1Q8NBB4 408 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CCNYQ8ND76 341 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 GPRC5AQ8NFJ5 357 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 RHEBL1Q8TAI7 183 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 GATAD2BQ8WXI9 593 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CHFRQ96EP1 664 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PHYHIPLQ96FC7 376 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ELF4Q99607 663 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 MAPKAP1Q9BPZ7 522 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CPPED1Q9BRF8 314 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CHIAQ9BZP6 476 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TGIF2Q9GZN2 237 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM134Q9H6X4 195 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 SF3B6Q9Y3B4 125 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TRDV1A0A1B0GX56 115 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM72A0PK05 275 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 H7C1Q1 480 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 DCLK1O15075 740 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 MID1O15344 667 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 EIF4E2O60573 245 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 GRAP2O75791 330 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CNMDO75829 334 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 FGF19O95750 216 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR8G3PP0DMU2 310 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 IFNGR1P15260 489 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 RPA2P15927 270 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 NQO2P16083 231 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 MGMTP16455 207 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 GMFBP60983 142 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 BEX3Q00994 111 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR8G1Q15617 311 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZSWIM7Q19AV6 140 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC39A12Q504Y0 691 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 RNASE10Q5GAN6 216 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM201Q5SNT2 666 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 ARHGAP40Q5TG30 622 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 KIAA0930Q6ICG6 404 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 PTCHD4Q6ZW05 846 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 OAFQ86UD1 273 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TPRA1Q86W33 373 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CPXM2Q8N436 756 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 TOMM5Q8N4H5 51 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 BMPERQ8N8U9 685 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 RELL2Q8NC24 303 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 BEND2Q8NDZ0 799 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR9A2Q8NGT5 310 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR4Q3Q8NH05 313 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 HIST1H2BAQ96A08 127 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 C1GALT1C1Q96EU7 318 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 CDKN2AIPNLQ96HQ2 116 aa8.36□□□□□ -1.07
CDC42BPA-206ENST00000429440 C7orf34Q96L11 122 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms