RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 OR8J2Q8NGG1 315 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SPRYD4Q8WW59 207 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC38A2Q96QD8 506 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 MGME1Q9BQP7 344 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 EVA1AQ9H8M9 152 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 THSD1Q9NS62 852 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC22A11Q9NSA0 550 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 FAM120CQ9NX05 1096 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CNIH4Q9P003 139 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CD84Q9UIB8 345 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CHST2Q9Y4C5 530 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SIRT4Q9Y6E7 314 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 C7orf66A4D0T2 115 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF593O00488 134 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 INPPL1O15357 1258 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SNAPINO95295 136 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 GABRA5P31644 462 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 RPL9P32969 192 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PITPNBP48739 271 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 WDR5P61964 334 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CACNG1Q06432 222 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ABRQ12979 859 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CCSMST1Q4G0I0 132 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 XKR4Q5GH76 650 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 GPRC6AQ5T6X5 926 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PGBD2Q6P3X8 592 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 METAP1DQ6UB28 335 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ASPGQ86U10 573 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 TSPAN33Q86UF1 283 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CSGALNACT1Q8TDX6 532 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ORAI1Q96D31 301 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SPTBP11277 2137 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ARID1BQ8NFD5 2236 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PLXNA4Q9HCM2 1894 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 KCNE1BA0A087WTH5 132 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 MEIKINA0A087WXM9 373 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 MYADML2A6NDP7 307 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ANKDD1BA6NHY2 528 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 OR6C75A6NL08 312 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PRR23D1E9PI22 279 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 TO15178 435 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC2A10O95528 541 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 TGFB1P01137 390 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PRR23D2P0DMB1 279 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 IRF1P10914 325 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 JUPP14923 745 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 IRS1P35568 1242 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 GIPRP48546 466 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SNRPGP62308 76 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 RAE1P78406 368 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 E2F1Q01094 437 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 NFATC2Q13469 925 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 MEDAGQ5VYS4 303 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CD276Q5ZPR3 534 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 FIP1L1Q6UN15 594 aaKnown RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SERPINA12Q8IW75 414 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 OR52B4Q8NGK2 314 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 OR13C5Q8NGS8 318 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 NANPQ8TBE9 248 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 WDR20Q8TBZ3 569 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 KAT2AQ92830 837 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ACBD6Q9BR61 282 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC19A3Q9BZV2 496 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 TINAGL1Q9GZM7 467 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ARL6Q9H0F7 186 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 NTMQ9P121 344 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF69Q9UC07 566 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PFDN2Q9UHV9 154 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 POMT2Q9UKY4 750 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 GREB1Q4ZG55 1949 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 PQLC2LA1A4F0 135 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 GAPDHSO14556 408 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 FRS3O43559 492 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 HIST1H2AGP0C0S8 130 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 BTF3P20290 206 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 HIST1H2ADP20671 130 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MMP11P24347 488 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CAPZA2P47755 286 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MTNR1AP48039 350 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 TAF10Q12962 218 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 ILKQ13418 452 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 C18orf63Q68DL7 685 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC30A6Q6NXT4 461 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CORO6Q6QEF8 472 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 RPTNQ6XPR3 784 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC16A13Q7RTY0 426 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CHCHD4Q8N4Q1 142 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 HIST1H2AHQ96KK5 128 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 HIST1H2AJQ99878 128 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 PITHD1Q9GZP4 211 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 NFKBIL1Q9UBC1 381 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MGAT4CQ9UBM8 478 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 TESQ9UGI8 421 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 FBXW2Q9UKT8 454 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 KCNK7Q9Y2U2 307 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 FXYD6-FXYD2A0A087WZ82 144 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms