RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 EXOC3L2Q2M3D2 409 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 TSPYL5Q86VY4 417 aaPredicted RBP19.51■□□□□ 0.71
GPC1-202ENST00000420138 SLITRK4Q8IW52 837 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ZNF555Q8NEP9 628 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 OR52J3Q8NH60 311 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 VANGL1Q8TAA9 524 aaPredicted RBP19.51■□□□□ 0.71
GPC1-202ENST00000420138 MUS81Q96NY9 551 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 FANCEQ9HB96 536 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 PAPOLBQ9NRJ5 636 aaKnown RBP19.51■□□□□ 0.71
GPC1-202ENST00000420138 FBXO34Q9NWN3 711 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 SIDT1Q9NXL6 827 aaKnown RBP19.51■□□□□ 0.71
GPC1-202ENST00000420138 RHCGQ9UBD6 479 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 C3orf18Q9UK00 162 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ENO4A6NNW6 628 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 NTN3O00634 580 aaPredicted RBP19.5■□□□□ 0.71
GPC1-202ENST00000420138 COQ9O75208 318 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 TIAF1O95411 115 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 IGFBP5P24593 272 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 GALNSP34059 522 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 PSG6Q00889 435 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 ACY1Q03154 408 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 FUT7Q11130 342 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 TCF15Q12870 199 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 SF3A2Q15428 464 aaKnown RBP19.5■□□□□ 0.71
GPC1-202ENST00000420138 C1orf189Q5VU69 101 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 ADAMTS16Q8TE57 1224 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 DHRS1Q96LJ7 313 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 DPYSL5Q9BPU6 564 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 LRFN3Q9BTN0 628 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 LMF2Q9BU23 707 aaKnown RBP19.5■□□□□ 0.71
GPC1-202ENST00000420138 SAP130Q9H0E3 1048 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 SYNDIG1Q9H7V2 258 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 SLC22A11Q9NSA0 550 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 DTX4Q9Y2E6 619 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 FAM32AQ9Y421 112 aaKnown RBP19.5■□□□□ 0.71
GPC1-202ENST00000420138 MMACHCQ9Y4U1 282 aa19.5■□□□□ 0.71
GPC1-202ENST00000420138 COL5A1P20908 1838 aaPredicted RBP19.49■□□□□ 0.71
GPC1-202ENST00000420138 CENPVL1A0A0U1RR11 272 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 GXYLT2A0PJZ3 443 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 CCDC160A6NGH7 325 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 CLPSP04118 112 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 ALPPP05187 535 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 SERTAD2Q14140 314 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 ZNF267Q14586 743 aaPredicted RBP19.49■□□□□ 0.71
GPC1-202ENST00000420138 NPTX1Q15818 432 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 MICAQ29983 383 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 RFX4Q33E94 735 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 ZNF311Q5JNZ3 666 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 DCST2Q5T1A1 773 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 AP1ARQ63HQ0 302 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 RHBDD2Q6NTF9 364 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 GALNT5Q7Z7M9 940 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 GALNT15Q8N3T1 639 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 SLC38A9Q8NBW4 561 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 OR6T1Q8NGN1 323 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 VSTM2LQ96N03 204 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 PTCHD1Q96NR3 888 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 OR6C1Q96RD1 312 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 PRRX2Q99811 253 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 YIPF2Q9BWQ6 316 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 MTHFD2LQ9H903 347 aaPredicted RBP19.49■□□□□ 0.71
GPC1-202ENST00000420138 FOLH1BQ9HBA9 442 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 RLIMQ9NVW2 624 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 A4GNTQ9UNA3 340 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 GPR55Q9Y2T6 319 aaPredicted RBP19.49■□□□□ 0.71
GPC1-202ENST00000420138 WDR45Q9Y484 360 aa19.49■□□□□ 0.71
GPC1-202ENST00000420138 HEMK1Q9Y5R4 338 aaPredicted RBP19.49■□□□□ 0.71
GPC1-202ENST00000420138 AGRPO00253 132 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 SYT5O00445 386 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 PCDH17O14917 1159 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 FBLP22087 321 aaKnown RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 GABRA3P34903 492 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 RHAGQ02094 409 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 VWA2Q5GFL6 755 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 DHRS4L2Q6PKH6 230 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 QSOX2Q6ZRP7 698 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 COX15Q7KZN9 410 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 PIK3C3Q8NEB9 887 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 PRSS33Q8NF86 280 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 OR52P1PQ8NH57 321 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 GIPC3Q8TF64 312 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 TSLPQ969D9 159 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 RNF31Q96EP0 1072 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 CNDP2Q96KP4 475 aaKnown RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 ARHGDIGQ99819 225 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 NMNAT1Q9HAN9 279 aaPredicted RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 KCNE5Q9UJ90 142 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 ORC6Q9Y5N6 252 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 E9PQ18 207 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 SLC16A6O15403 523 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 FLRT2O43155 660 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 GADD45GO95257 159 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 PRKAR1BP31321 381 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 RAD23AP54725 363 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 HPCAP84074 193 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 ZNF155Q12901 538 aaPredicted RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 BIKQ13323 160 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 CLPPQ16740 277 aaPredicted RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 DEF8Q6ZN54 512 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 THAP5Q7Z6K1 395 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms