RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HMGB4Q8WW32 186 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 DPH7Q9BTV6 452 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 WRAP53Q9BUR4 548 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 VN1R3Q9BXE9 311 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 C1GALT1Q9NS00 363 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 GPR160Q9UJ42 338 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 RECKO95980 971 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 SRPRAP08240 638 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 HSD3B1P14060 373 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CXCL2P19875 107 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CR2P20023 1033 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 GIPRP48546 466 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR10A3P58181 314 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 DGCR2P98153 550 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CHRNA6Q15825 494 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 IER5LQ5T953 404 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 OVCH2Q7RTZ1 564 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 LRRC28Q86X40 367 aaPredicted RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ADAMTS19Q8TE59 1207 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 PAWRQ96IZ0 340 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ARHGAP9Q9BRR9 750 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 FBXO44Q9H4M3 255 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZNF768Q9H5H4 540 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZCCHC4Q9H5U6 513 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 SGK2Q9HBY8 427 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 SCML2Q9UQR0 700 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ANXA2P2A6NMY6 339 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 H7C0S8 307 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZNF593O00488 134 aaPredicted RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 SEMA7AO75326 666 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CLDN7O95471 211 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 WDPCPO95876 746 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 EPHX1P07099 455 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 SCRN3Q0VDG4 424 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 MAP4K2Q12851 820 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ALG1LQ6GMV1 187 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ESPNLQ6ZVH7 1005 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 METTL3Q86U44 580 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 FAM26EQ8N5C1 309 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZNF454Q8N9F8 522 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 ADAMTS14Q8WXS8 1223 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 RAB8BQ92930 207 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 WFDC6Q9BQY6 131 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 PELOQ9BRX2 385 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 EGLN3Q9H6Z9 239 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 RDH14Q9HBH5 336 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 IL26Q9NPH9 171 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CYSLTR2Q9NS75 346 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 PRUNE2Q8WUY3 3088 aa13.85□□□□□ -0.19
NCKIPSD-204ENST00000416649 E7EQ34 232 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 K7ERQ8 282 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 CASC3O15234 703 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 GLAP06280 429 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 RHOCP08134 193 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 JUPP14923 745 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 PRPH2P23942 346 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 FLI1Q01543 452 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 PLD1Q13393 1074 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 TCTN3Q6NUS6 607 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 L3MBTL4Q8NA19 623 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 TMEM168Q9H0V1 697 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 MGAT4CQ9UBM8 478 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 PTPRDP23468 1912 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 TMEM129A0AVI4 362 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 GNRH1P01148 92 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ACP2P11117 423 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ATP5A1P25705 553 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 MAOBP27338 520 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 SHC1P29353 583 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC1A3P43003 542 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ASMTP46597 345 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ERVK-25P63136 954 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 TAP2Q03519 686 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 Q6ZTK2 550 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 IQCHQ86VS3 1027 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 PAQR7Q86WK9 346 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 OXR1Q8N573 874 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 SPRYD4Q8WW59 207 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ASZ1Q8WWH4 475 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 TBX5Q99593 518 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 POLDIP3Q9BY77 421 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR10A4Q9H209 315 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 MAGEH1Q9H213 219 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZFYVE1Q9HBF4 777 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 FBXW2Q9UKT8 454 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 PRSS44E7EML9 344 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 G3V3Q6 166 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ARPC5O15511 151 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 MTX2O75431 263 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 C4BPBP20851 252 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 CCR7P32248 378 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 SNTB2Q13425 540 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZNF630Q2M218 657 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC36A2Q495M3 483 aa13.84□□□□□ -0.19
NCKIPSD-204ENST00000416649 GGTA1PQ4G0N0 100 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms