RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 NCLNQ969V3 563 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 SPDL1Q96EA4 605 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 NEURL3Q96EH8 262 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 LCORQ96JN0 433 aaPredicted RBP7.12□□□□□ -1.27
RBM39-209ENST00000416529 PANX1Q96RD7 426 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 HOPXQ9BPY8 73 aaPredicted RBP7.12□□□□□ -1.27
RBM39-209ENST00000416529 ELAC2Q9BQ52 826 aaKnown RBP7.12□□□□□ -1.27
RBM39-209ENST00000416529 EBF4Q9BQW3 602 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 G6PC3Q9BUM1 346 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 ACTRT3Q9BYD9 372 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 HOXD1Q9GZZ0 328 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 MYLK2Q9H1R3 596 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 GLIPR2Q9H4G4 154 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 EFCAB1Q9HAE3 211 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 Q9N2J8 555 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 EXD2Q9NVH0 621 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 CALML5Q9NZT1 146 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 CNIH4Q9P003 139 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 BAIAP2L1Q9UHR4 511 aa7.12□□□□□ -1.27
RBM39-209ENST00000416529 EVPLLA8MZ36 301 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 AGRPO00253 132 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 TP53I11O14683 189 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 AKAP10O43572 662 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 DNAJB6O75190 326 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ATP5HO75947 161 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 NKX2-2O95096 273 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 HOXB6P17509 224 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 FEN1P39748 380 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 MAP3K8P41279 467 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 CCT3P49368 545 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 RASSF2P50749 326 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 PNLIPRP2P54317 469 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 WNT3P56703 355 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 UFM1P61960 85 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 RPS18P62269 152 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 CXADRP78310 365 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 RBBP4Q09028 425 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ZNF267Q14586 743 aaPredicted RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 EBPQ15125 230 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 PIGGQ5H8A4 983 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 RPS26P11Q5JNZ5 115 aaPredicted RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 SPANXN4Q5MJ08 99 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ACER2Q5QJU3 275 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 CGB2Q6NT52 195 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 CDC73Q6P1J9 531 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 LANCL3Q6ZV70 420 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 NUP54Q7Z3B4 507 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 MISPQ8IVT2 679 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 PRSS58Q8IYP2 241 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ZNF843Q8N446 348 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ZADH2Q8N4Q0 377 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ZNF441Q8N8Z8 693 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 BHLHE22Q8NFJ8 381 aaPredicted RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 OR7A2PQ8NGA2 310 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 OR8J3Q8NGG0 315 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 SLC35B4Q969S0 331 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 SLC35A4Q96G79 324 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 THOC3Q96J01 351 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 VSTM2LQ96N03 204 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 OR8D2Q9GZM6 311 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 PIGUQ9H490 435 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 ZNF160Q9HCG1 818 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 FAF1Q9UNN5 650 aaPredicted RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 ABCG2Q9UNQ0 655 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 GPR55Q9Y2T6 319 aaPredicted RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 HEMK1Q9Y5R4 338 aaPredicted RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 TLN1Q9Y490 2541 aaKnown RBP7.11□□□□□ -1.27
RBM39-209ENST00000416529 NOTCH2Q04721 2471 aa7.11□□□□□ -1.27
RBM39-209ENST00000416529 DOPEY2Q9Y3R5 2298 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 TRAV17A0A0B4J275 112 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 TRBV11-1A0A0K0K1C0 115 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 OR6C70A6NIJ9 312 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 ARGFXA6NJG6 315 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 GLOD5A6NK44 160 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 UPK1AO00322 258 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 HS6ST1O60243 411 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 SEC24DO94855 1032 aaPredicted RBP7.1□□□□□ -1.27
RBM39-209ENST00000416529 SNX4O95219 450 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 LRATO95237 230 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 ANP32DO95626 131 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 CBX7O95931 251 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 ALOX5P09917 674 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 GPX2P18283 190 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 KRT20P35900 424 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 CYB561P49447 251 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 CLK3P49761 638 aaKnown RBP7.1□□□□□ -1.27
RBM39-209ENST00000416529 EMDP50402 254 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 HLCSP50747 726 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 SSR4P51571 173 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 PGDP52209 483 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 SEC24CP53992 1094 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 HBA1P69905 142 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 EEF1A2Q05639 463 aaKnown RBP7.1□□□□□ -1.27
RBM39-209ENST00000416529 KLF10Q13118 480 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 TBR1Q16650 682 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 DECR1Q16698 335 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.1□□□□□ -1.271e-14■■□□□ 11.4
RBM39-209ENST00000416529 DEFB109BQ30KR1 87 aa7.1□□□□□ -1.27
RBM39-209ENST00000416529 PGS1Q32NB8 556 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms