RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 COQ10AQ96MF6 247 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 CST11Q9H112 138 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 VAPAQ9P0L0 249 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 GLS2Q9UI32 602 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 ACSL6Q9UKU0 697 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF646O15015 1829 aaPredicted RBP11.29□□□□□ -0.6
PTPRF-205ENST00000414879 GFYI3L273 518 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 GALR3O60755 368 aaPredicted RBP11.29□□□□□ -0.6
PTPRF-205ENST00000414879 PRKCAP17252 672 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
PTPRF-205ENST00000414879 PRDX3P30048 256 aaKnown RBP11.29□□□□□ -0.6
PTPRF-205ENST00000414879 NUDT6P53370 316 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 DCST2Q5T1A1 773 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 SPEM1Q8N4L4 309 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 OR9A2Q8NGT5 310 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 TNFAIP8L1Q8WVP5 186 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 INPP5KQ9BT40 448 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 ANKRD60Q9BZ19 345 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 DLGAP1O14490 977 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 OR7A17O14581 309 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 VILLO15195 856 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 SCGNO76038 276 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 IL33O95760 270 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 ITGA3P26006 1051 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 CPOXP36551 454 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 C1orf189Q5VU69 101 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 LINGO2Q7L985 606 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 UBE2Q1Q7Z7E8 422 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 OR4N5Q8IXE1 308 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 CREB3L4Q8TEY5 395 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 C1QTNF2Q9BXJ5 285 aa11.29□□□□□ -0.6
PTPRF-205ENST00000414879 MEGF11A6BM72 1044 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 H0YC42 278 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 WRBO00258 174 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SYT5O00445 386 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 FZD6O60353 706 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 GRK5P34947 590 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 DCTP40126 519 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 CSNK2A1P68400 391 aaPredicted RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ARFRP1Q13795 201 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 FAM69BQ5VUD6 431 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 C3P1Q6ZMU1 363 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 OR51G2Q8NGK0 314 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ACOT13Q9NPJ3 140 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 EURLQ9NYK6 297 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 CLPXO76031 633 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 RIDAP52758 137 aaKnown RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 GPR139Q6DWJ6 353 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 PLCZ1Q86YW0 608 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 CMIPQ8IY22 773 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 KCNK12Q9HB15 430 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ZBTB20Q9HC78 741 aaPredicted RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 AASSQ9UDR5 926 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 GABBR2O75899 941 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF28P17035 718 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 MELKQ14680 651 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SPHARQ15513 63 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 RASSF6Q6ZTQ3 369 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 BTN2A1Q7KYR7 527 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 FNDC8Q8TC99 324 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF221Q9UK13 617 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 CBLCQ9ULV8 474 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 T-ENOLP0DO92 83 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SLC9A3P48764 834 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 RRADP55042 308 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 BTBD16Q32M84 506 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SLC18B1Q6NT16 456 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ENPP6Q6UWR7 440 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 ANKRD19PQ9H560 264 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 MOV10Q9HCE1 1003 aaKnown RBP11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SLC39A1Q9NY26 324 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
PTPRF-205ENST00000414879 TEX46H3BTG2 121 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 SGK494L7N484 410 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 LHCGRP22888 699 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 MTNR1AP48039 350 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 NR0B1P51843 470 aaKnown RBP11.27□□□□□ -0.6
PTPRF-205ENST00000414879 SLC3A1Q07837 685 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 PPP1R8Q12972 351 aaKnown RBP11.27□□□□□ -0.6
PTPRF-205ENST00000414879 DEFB110Q30KQ9 67 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 DCAF12Q5T6F0 453 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 IER5LQ5T953 404 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms