RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 UGT1A5P35504 534 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT2B10P36537 528 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 NPY2RP49146 381 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CLCN7P51798 805 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FOXL2P58012 376 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 NXPH1P58417 271 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 RAP2BP61225 183 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 RPS21P63220 83 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SPIBQ01892 262 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TSTA3Q13630 321 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 RIN1Q13671 783 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 IL13RA2Q14627 380 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SIX1Q15475 284 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 HLA-BQ31612 363 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CYP27C1Q4G0S4 372 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM52BQ4KMG9 183 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TEX44Q53QW1 395 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF789Q5FWF6 425 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FBXO48Q5FWF7 155 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CERCAMQ5T4B2 595 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 LRRC66Q68CR7 880 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TTC27Q6P3X3 843 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CES3Q6UWW8 571 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 C16orf89Q6UX73 402 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 WDR88Q6ZMY6 472 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 DPPA4Q7L190 304 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CXXC5Q7LFL8 322 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PID1Q7Z2X4 250 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 HSD11B1LQ7Z5J1 315 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CUZD1Q86UP6 607 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF573Q86YE8 665 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLC13A5Q86YT5 568 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLC22A9Q8IVM8 553 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CARFQ8N187 725 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLC25A41Q8N5S1 370 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF321PQ8N8H1 164 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PLA2G15Q8NCC3 412 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLC24A4Q8NFF2 622 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 OR6S1Q8NH40 331 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 NETO1Q8TDF5 533 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UBLCP1Q8WVY7 318 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PIH1D2Q8WWB5 315 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 GLMPQ8WWB7 406 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TANKQ92844 425 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FUBP1Q96AE4 644 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TSPAN17Q96FV3 270 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 IMP4Q96G21 291 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 MS4A14Q96JA4 679 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ART5Q96L15 291 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 BMFQ96LC9 184 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 MCCC1Q96RQ3 725 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TRIB3Q96RU7 358 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZBTB18Q99592 522 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 KLF6Q99612 283 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SELENOSQ9BQE4 189 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 APOL2Q9BQE5 337 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM121Q9BTD3 319 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 C1orf50Q9BV19 199 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 KATNB1Q9BVA0 655 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FICDQ9BVA6 458 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 KIFC1Q9BW19 673 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF717Q9BY31 904 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 XKR8Q9H6D3 395 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 GAREM1Q9H706 876 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A7Q9HAW7 530 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A10Q9HAW8 530 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A8Q9HAW9 530 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PCDH9Q9HC56 1237 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 GPN1Q9HCN4 374 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM9BQ9NQ34 198 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM184CQ9NVA4 438 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 EHD3Q9NZN3 535 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SENP1Q9P0U3 644 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 Q9UFV3 132 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ENOPH1Q9UHY7 261 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CD84Q9UIB8 345 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 DNPEPQ9ULA0 475 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CLEC4AQ9UMR7 237 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 DLGAP4Q9Y2H0 992 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ACOT9Q9Y305 439 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TESMINQ9Y4I5 508 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 OR1A2Q9Y585 309 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 COPG1Q9Y678 874 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 KNL1Q8NG31 2342 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 RALGAPA1Q6GYQ0 2036 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SPTBN2O15020 2390 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PI4KAP42356 2102 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CACNA1EQ15878 2313 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TRPM6Q9BX84 2022 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 A0A087WZY1 265 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FAM230AA0A1W2PPH8 454 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM120BA0PK00 339 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ISPDA4D126 451 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SMIM23A6NLE4 172 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PRR5-ARHGAP8B1AHC4 643 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PRAMEF26H0Y7S4 382 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms