RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 UBQLN3Q9H347 655 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 ZNF385DQ9H6B1 395 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 BOKQ9UMX3 212 aaPredicted RBP12.84□□□□□ -0.35
GYPC-203ENST00000409836 ZNF835Q9Y2P0 537 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 USP9YO00507 2555 aaPredicted RBP12.84□□□□□ -0.35
GYPC-203ENST00000409836 FREM3P0C091 2139 aa12.83□□□□□ -0.35
GYPC-203ENST00000409836 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 ACOT7O00154 380 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 IL33O95760 270 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 IL6P05231 212 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 KRT16P08779 473 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 STSP08842 583 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 ACP2P11117 423 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 ELAVL4P26378 380 aaKnown RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 UQCRFS1P47985 274 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 PRIM2P49643 509 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 AQP5P55064 265 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 GPR85P60893 370 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 SLC30A6Q6NXT4 461 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 CDC73Q6P1J9 531 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 Q6ZPB1 254 aaPredicted RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 SLC22A16Q86VW1 577 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 PRR22Q8IZ63 422 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 CLECL1Q8IZS7 167 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 FAM109AQ8N4B1 249 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 VPS37AQ8NEZ2 397 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 FAM110BQ8TC76 370 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 RILPQ96NA2 401 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 PIGUQ9H490 435 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 ZFP64Q9NPA5 681 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 SERHLQ9NQF3 203 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 ZCCHC3Q9NUD5 404 aaKnown RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 TUBA8Q9NY65 449 aaPredicted RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 CBLCQ9ULV8 474 aa12.83□□□□□ -0.36
GYPC-203ENST00000409836 NCOA6Q14686 2063 aaPredicted RBP12.83□□□□□ -0.36
GYPC-203ENST00000409836 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 PRAMEF25A6NGN4 478 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 SNPHO15079 494 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 NME6O75414 186 aaPredicted RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 SLC22A3O75751 556 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 GUSBP08236 651 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 EFNA1P20827 205 aaPredicted RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 GNLYP22749 145 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 PTPN6P29350 595 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 S100A3P33764 101 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 MAGEA8P43361 318 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 CCT3P49368 545 aaKnown RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 GAS1P54826 345 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 PSMD4P55036 377 aaKnown RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 GAB1Q13480 694 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 DUSP5Q16690 384 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 DECR1Q16698 335 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 PGS1Q32NB8 556 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 PRAMEF20Q5VT98 475 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 SAXO2Q658L1 398 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 GHDCQ8N2G8 530 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 MIER2Q8N344 545 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 OR4N2Q8NGD1 307 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 NODALQ96S42 347 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 ZBTB18Q99592 522 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 DOHHQ9BU89 302 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 OSBPL11Q9BXB4 747 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 ACTRT3Q9BYD9 372 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 SEC14L3Q9UDX4 400 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 MRTO4Q9UKD2 239 aaKnown RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 OR10H1Q9Y4A9 318 aa12.82□□□□□ -0.36
GYPC-203ENST00000409836 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.82□□□□□ -0.36
GYPC-203ENST00000409836 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 FAM234BA2RU67 622 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 ASNA1O43681 348 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 FADS1O60427 444 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 ZCCHC18P0CG32 403 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 HOXB9P17482 250 aaPredicted RBP12.81□□□□□ -0.36
GYPC-203ENST00000409836 IL12BP29460 328 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 KRT20P35900 424 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 KCNJ2P63252 427 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 METTL21CQ5VZV1 264 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 NXNQ6DKJ4 435 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 FGD2Q7Z6J4 655 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 TMEM251Q8N6I4 163 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 OIT3Q8WWZ8 545 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 TMCO6Q96DC7 493 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 NEURL3Q96EH8 262 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 ZNF317Q96PQ6 595 aaPredicted RBP12.81□□□□□ -0.36
GYPC-203ENST00000409836 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 BTBD2Q9BX70 525 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 SERHL2Q9H4I8 314 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 ACKR4Q9NPB9 350 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 SLC52A3Q9NQ40 469 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
GYPC-203ENST00000409836 C15orf41Q9Y2V0 281 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms