RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TAGAPQ8N103 731 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 ARHGAP24Q8N264 748 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC16A11Q8NCK7 471 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 FBXO27Q8NI29 283 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 GPR151Q8TDV0 419 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 TMEM125Q96AQ2 219 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 OR7D2Q96RA2 312 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 KAT8Q9H7Z6 458 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 TAS2R1Q9NYW7 299 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 MYOTQ9UBF9 498 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 MRTO4Q9UKD2 239 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 OR10H1Q9Y4A9 318 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 TENM4Q6N022 2769 aa15.27■□□□□ 0.03
TSPAN4-208ENST00000409531 MAST4O15021 2626 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 A8MUI8 341 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC28A2O43868 658 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 PRKNO60260 465 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CELA2AP08217 269 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CT45A8P0DMV1 189 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CT45A9P0DMV2 189 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 ACP2P11117 423 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 BMP2P12643 396 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 GABRA3P34903 492 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 MAN2A2P49641 1150 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 NR0B1P51843 470 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC7A2P52569 658 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CASP9P55211 416 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 DSTNP60981 165 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 GNA13Q14344 377 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 ZSCAN26Q16670 478 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CYP51A1Q16850 503 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SPATS1Q496A3 300 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CYP27C1Q4G0S4 372 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CT45A2Q5DJT8 189 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 RABL3Q5HYI8 236 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 COX20Q5RI15 118 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 BNC2Q6ZN30 1099 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 PRICKLE2Q7Z3G6 844 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 RPS19BP1Q86WX3 136 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC15A3Q8IY34 581 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 ARMC10Q8N2F6 343 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC15A4Q8N697 577 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 HORMAD2Q8N7B1 307 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 COX18Q8N8Q8 333 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 ZNF441Q8N8Z8 693 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 OR5D16Q8NGK9 328 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC22A8Q8TCC7 542 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 THAP3Q8WTV1 239 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 XAGE5Q8WWM1 108 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC7A6OSQ96CW6 309 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 BTBD10Q9BSF8 475 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 SERHL2Q9H4I8 314 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 IKZF5Q9H5V7 419 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 ADA2Q9NZK5 511 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 ABCD2Q9UBJ2 740 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 P2RX2Q9UBL9 471 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 LIPT1Q9Y234 373 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 CPAMD8Q8IZJ3 1885 aa15.26■□□□□ 0.03
TSPAN4-208ENST00000409531 HMGN4O00479 90 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 TO15178 435 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 DPM1O60762 260 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 OR12D1P0DN82 309 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 ETFAP13804 333 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 TRHRP34981 398 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 KRT20P35900 424 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 CASRP41180 1078 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 PSMD4P55036 377 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 CORO7P57737 925 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 EEFSECP57772 596 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 POU6F2P78424 691 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 SELPLGQ14242 412 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 DUSP5Q16690 384 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 MEP1AQ16819 746 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 SAMD4BQ5PRF9 694 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 GCNT6Q5T4J0 391 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 AGAP7PQ5VUJ5 663 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 C16orf62Q7Z3J2 963 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 WDR53Q7Z5U6 358 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 OR10A6Q8NH74 314 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 FBXO30Q8TB52 745 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 BRIX1Q8TDN6 353 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 SLC35A4Q96G79 324 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 ZNF354BQ96LW1 612 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 AGAP4Q96P64 663 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 BTBD2Q9BX70 525 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 NXF5Q9H1B4 397 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 CMTM6Q9NX76 183 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 ABI3Q9P2A4 366 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 TMEM181Q9P2C4 612 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 CBLCQ9ULV8 474 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 PRPF19Q9UMS4 504 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 YARS2Q9Y2Z4 477 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 EXPH5Q8NEV8 1989 aa15.25■□□□□ 0.03
TSPAN4-208ENST00000409531 TMEM200CA6NKL6 621 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 WWP2O00308 870 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 NME4O00746 187 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 CDK2AP1O14519 115 aa15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 NME6O75414 186 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-208ENST00000409531 TNFRSF21O75509 655 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms