RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FAM200BP0CF97 657 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 KRT13P13646 458 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 PRKACGP22612 351 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 HTR2AP28223 471 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 GYG1P46976 350 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 RGS19P49795 217 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 NDST2P52849 883 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 RPS8P62241 208 aaKnown RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 IL9RQ01113 521 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 ELP6Q0PNE2 266 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF177Q13360 481 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 RAPSNQ13702 412 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 KIAA0141Q14154 515 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 FASTKQ14296 549 aaKnown RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 HKDC1Q2TB90 917 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF528Q3MIS6 628 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 CAVIN4Q5BKX8 364 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 DCAF12Q5T6F0 453 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 STEAP1BQ6NZ63 245 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SASS6Q6UVJ0 657 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 MEX3BQ6ZN04 569 aaKnown RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 PAQR9Q6ZVX9 377 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 P4HA3Q7Z4N8 544 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 CATSPERDQ86XM0 798 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 WDR49Q8IV35 697 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 PYROXD2Q8N2H3 581 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 FADS6Q8N9I5 356 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 LINC00301Q8NCQ3 95 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 NUP37Q8NFH4 326 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 WDR36Q8NI36 951 aaKnown RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLCO2A1Q92959 643 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 C19orf43Q9BQ61 176 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SYT15Q9BQS2 421 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 EGLN1Q9GZT9 426 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 NT5C3AQ9H0P0 336 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SP140LQ9H930 580 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 WDR76Q9H967 626 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 LY9Q9HBG7 655 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 CIDEBQ9UHD4 219 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 ATP6V1HQ9UI12 483 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC9A8Q9Y2E8 581 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 MRPS7Q9Y2R9 242 aaKnown RBP4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 MFHAS1Q9Y4C4 1052 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 IKBKGQ9Y6K9 419 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 ROBO1Q9Y6N7 1651 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 SCN5AQ14524 2016 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 BCL9LQ86UU0 1499 aa4.05□□□□□ -1.76
HMGB3P18-201ENST00000406327 LOC390937A0A1W2PQ73 354 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 BCLAF3A2AJT9 711 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 NPIPB9F8W1W9 429 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 H3BTX0 84 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 MPHOSPH10O00566 681 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 TFECO14948 347 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ADAM12O43184 909 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 TLX2O43763 284 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 GMFGO60234 142 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 STK17BO94768 372 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF432O94892 652 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 IGLV1-44P01699 117 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 TPM3P06753 285 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 FHP07954 510 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC35G4P0C7Q5 338 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 CMA1P23946 247 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 OPRL1P41146 370 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 IFNAR2P48551 515 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC1A6P48664 564 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 TDO2P48775 406 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 RPL27P61353 136 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 RPS4XP62701 263 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 GNB1P62873 340 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 PPIAP62937 165 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 PMP22Q01453 160 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 UPP1Q16831 310 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ECSCRQ19T08 205 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 POM121L1PQ3SYA9 428 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ADAMTSL4-AS1Q5T5F5 129 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 RHBDD2Q6NTF9 364 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 CCDC73Q6ZRK6 1079 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SMIM5Q71RC9 77 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 LUZP1Q86V48 1076 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 NBPF5PQ86XG9 351 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 TBC1D21Q8IYX1 336 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 GCNT2Q8N0V5 402 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 IPMKQ8NFU5 416 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ATP8B4Q8TF62 1192 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF501Q96CX3 271 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 CCDC51Q96ER9 411 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 DTNBP1Q96EV8 351 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 ALKBH3Q96Q83 286 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 RIOK1Q9BRS2 568 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 NLNQ9BYT8 704 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 RNF41Q9H4P4 317 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC25A19Q9HC21 320 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SPHK2Q9NRA0 654 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 NDE1Q9NXR1 346 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 RAI14Q9P0K7 980 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 P2RX2Q9UBL9 471 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 EXTL2Q9UBQ6 330 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 BAIAP2L1Q9UHR4 511 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 FOXJ3Q9UPW0 622 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms