RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 IL7RP16871 459 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ATP6V1C1P21283 382 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 AQP4P55087 323 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 GANABQ14697 944 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 ATP6AP1Q15904 470 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZNF311Q5JNZ3 666 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 CDCP2Q5VXM1 449 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 HLA-DQA1Q5Y7H0 255 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 DEF8Q6ZN54 512 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 CCDC80Q76M96 950 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 VRK2Q86Y07 508 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 KBTBD2Q8IY47 623 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 HS3ST5Q8IZT8 346 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 CBR4Q8N4T8 237 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 PAPD5Q8NDF8 572 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 PLPP5Q8NEB5 264 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 OR52J3Q8NH60 311 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 OR14A16Q8NHC5 309 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 TMBIM1Q969X1 311 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 LIN37Q96GY3 246 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 FBXL20Q96IG2 436 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 VSTM2LQ96N03 204 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 LMF1Q96S06 567 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 SDF2Q99470 211 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 SPATA5L1Q9BVQ7 753 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 SLC38A1Q9H2H9 487 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 MAGIXQ9H6Y5 334 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 LIN28AQ9H9Z2 209 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 RLIMQ9NVW2 624 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 CALML5Q9NZT1 146 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 FOXJ2Q9P0K8 574 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 RHCGQ9UBD6 479 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 PRODH2Q9UF12 536 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZNF639Q9UID6 485 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 PADI1Q9ULC6 663 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 FAM32AQ9Y421 112 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 PCDHGA8Q9Y5G5 932 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 COL5A1P20908 1838 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 C2orf92A0A1B0GVN3 265 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 C9orf172C9J069 976 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 J3KTA2 159 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 M0R3H8 397 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 DLL1O00548 723 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 PEX12O00623 359 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 FRS3O43559 492 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 KCNK2O95069 426 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 TNFSF15O95150 251 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 DDAH2O95865 285 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ALBP02768 609 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 IFNW1P05000 195 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 TCN2P20062 427 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 MAGEA8P43361 318 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 NOVA1P51513 510 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 SLC37A1P57057 533 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 NCF4Q15080 339 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ARHGAP11BQ3KRB8 267 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 FLYWCH1Q4VC44 716 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 OGFRL1Q5TC84 451 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 OR2T5Q6IEZ7 315 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 TYW3Q6IPR3 259 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 HEPHL1Q6MZM0 1159 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZCCHC12Q6PEW1 402 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 C6orf15Q6UXA7 325 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 NPSR1Q6W5P4 371 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 FRRS1Q6ZNA5 592 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ANKRD37Q7Z713 158 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZAR1Q86SH2 424 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 STK32CQ86UX6 486 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 RBM45Q8IUH3 476 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 PEX5LQ8IYB4 626 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 PRR22Q8IZ63 422 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 METTL25Q8N6Q8 603 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZNF615Q8N8J6 731 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 GPR32P1Q8NGA4 272 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 OR2T29Q8NH02 315 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 OR52P1PQ8NH57 321 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 WDR36Q8NI36 951 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZNF721Q8TF20 911 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 RASSF5Q8WWW0 418 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 GEMIN6Q8WXD5 167 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 DNAJC9Q8WXX5 260 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 POP5Q969H6 163 aaKnown RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 EFHD2Q96C19 240 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZNF578Q96N58 590 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 STACQ99469 402 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 LPAR4Q99677 370 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 WFDC6Q9BQY6 131 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 NUDT9Q9BW91 350 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 BTBD2Q9BX70 525 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 RSPO3Q9BXY4 272 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 VCXQ9H320 206 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 BCL2L10Q9HD36 194 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 CTPS2Q9NRF8 586 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 DNAJB9Q9UBS3 223 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 ZNF451Q9Y4E5 1061 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 TESMINQ9Y4I5 508 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 GPC6Q9Y625 555 aaPredicted RBP3.44□□□□□ -1.86
RTN4-208ENST00000404909 CENPVL1A0A0U1RR11 272 aa3.44□□□□□ -1.86
RTN4-208ENST00000404909 VSTM2BA6NLU5 285 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms