RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 UQCRC2P22695 453 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 ZNHIT3Q15649 155 aaPredicted RBP23.4■■□□□ 1.34
U2AF1-203ENST00000398137 CT45A2Q5DJT8 189 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 ZNF766Q5HY98 468 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 OPN5Q6U736 354 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 LYPD8Q6UX82 237 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 ZNF621Q6ZSS3 439 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 GTF2H4Q92759 462 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 LMF2Q9BU23 707 aaKnown RBP23.4■■□□□ 1.34
U2AF1-203ENST00000398137 GPATCH2Q9NW75 528 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 ARL2BPQ9Y2Y0 163 aa23.4■■□□□ 1.34
U2AF1-203ENST00000398137 A0A1W2PP18 115 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 A8MVJ9 347 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 ACOX3O15254 700 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 ACP2P11117 423 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 CHI3L1P36222 383 aaPredicted RBP23.39■■□□□ 1.33
U2AF1-203ENST00000398137 CYB561P49447 251 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 PRIM2P49643 509 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 NRG3P56975 720 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 RPS26P62854 115 aaKnown RBP23.39■■□□□ 1.33
U2AF1-203ENST00000398137 PSG6Q00889 435 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 PLCXD2Q0VAA5 305 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 OR1C1Q15619 314 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 GTDC1Q4AE62 458 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 SPINK14Q6IE38 97 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 BHLHB9Q6PI77 547 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 IL20RBQ6UXL0 311 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 ZNF227Q86WZ6 799 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 CYP4Z2PQ8N1L4 340 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 SLC15A4Q8N697 577 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 CDRT4Q8N9R6 151 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 SLC9A6Q92581 669 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 SCMH1Q96GD3 660 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 SLC35G5Q96KT7 338 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 HPF1Q9NWY4 346 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 LRFN1Q9P244 771 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 OR10H1Q9Y4A9 318 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 PCDHGB6Q9Y5F9 930 aa23.39■■□□□ 1.33
U2AF1-203ENST00000398137 NEURL1O76050 574 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 ANP32DO95626 131 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 C1QCP02747 245 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 SNRPB2P08579 225 aaKnown RBP23.38■■□□□ 1.33
U2AF1-203ENST00000398137 ABCD3P28288 659 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 PAGE3Q5JUK9 113 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 C1QL3Q5VWW1 255 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 SAXO2Q658L1 398 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 ZNF787Q6DD87 383 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 C6orf120Q7Z4R8 191 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 TRIML2Q8N7C3 387 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 DNAJB8Q8NHS0 232 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 SPACA9Q96E40 222 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-203ENST00000398137 HSPBAP1Q96EW2 488 aa23.38■■□□□ 1.33
U2AF1-203ENST00000398137 FAF1Q9UNN5 650 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-203ENST00000398137 ANGPT2O15123 496 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 TO15178 435 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 FBXO45P0C2W1 286 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 PTPN6P29350 595 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 ADSLP30566 484 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-203ENST00000398137 GABRA3P34903 492 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 TRPC1P48995 793 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 CASP9P55211 416 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 DUSP5Q16690 384 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 ZNF791Q3KP31 576 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-203ENST00000398137 SNX32Q86XE0 403 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 GPALPP1Q8IXQ4 340 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 SLC34A3Q8N130 599 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 SLC16A11Q8NCK7 471 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 OR4N2Q8NGD1 307 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 GPR151Q8TDV0 419 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 HOXB13Q92826 284 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-203ENST00000398137 TMBIM1Q969X1 311 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 OMA1Q96E52 524 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 NEURL3Q96EH8 262 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 ACTRT3Q9BYD9 372 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 PAIP1Q9H074 479 aaKnown RBP23.37■■□□□ 1.33
U2AF1-203ENST00000398137 SERHL2Q9H4I8 314 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 TRIM45Q9H8W5 580 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-203ENST00000398137 Q9N2J8 555 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 LEF1Q9UJU2 399 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-203ENST00000398137 NPFFR2Q9Y5X5 522 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 CRYBG3Q68DQ2 2970 aa23.37■■□□□ 1.33
U2AF1-203ENST00000398137 MYO7BQ6PIF6 2116 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 A0A096LPI6 279 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 GXYLT2A0PJZ3 443 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 TTC36A6NLP5 189 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 SLC22A2O15244 555 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 ZG16O60844 167 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 ALOX5P09917 674 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 DCTP40126 519 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 MAP3K8P41279 467 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 MAPRE2Q15555 327 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 EXOSC6Q5RKV6 272 aaKnown RBP23.36■■□□□ 1.33
U2AF1-203ENST00000398137 GKAP1Q5VSY0 366 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-203ENST00000398137 CDC73Q6P1J9 531 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 ZCCHC12Q6PEW1 402 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 ANGPTL8Q6UXH0 198 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 GFRALQ6UXV0 394 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 RETREG3Q86VR2 466 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 FJX1Q86VR8 437 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 FAM13CQ8NE31 585 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms