RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NDUFV1P49821 464 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MPPED2Q15777 294 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM72AQ5TYM5 149 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GPR157Q5UAW9 335 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM72DQ6L9T8 149 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC27A4Q6P1M0 643 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 LIPIQ6XZB0 460 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CLEC20AQ6ZU45 233 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 KCTD8Q6ZWB6 473 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM72BQ86X60 149 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PELI3Q8N2H9 469 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MFSD9Q8NBP5 474 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CCDC54Q8NEL0 328 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ACVR1CQ8NER5 493 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 OR5M8Q8NGP6 311 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MOCOSQ96EN8 888 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 RHOVQ96L33 236 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PTCHD1Q96NR3 888 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GUCD1Q96NT3 240 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CPEB1Q9BZB8 566 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MUC13Q9H3R2 512 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 LTB4R2Q9NPC1 389 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CD320Q9NPF0 282 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TAS2R9Q9NYW1 312 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 KLK14Q9P0G3 267 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MAB21L2Q9Y586 359 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 IRAK3Q9Y616 596 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A087WZY1 265 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A1B0GW15 77 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 C1QTNF3-AMACRE9PGA6 284 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC33A1O00400 549 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CLDN5O00501 218 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SNAP91O60641 907 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PMPCBO75439 489 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC22A5O76082 557 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 LRIG2O94898 1065 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PF4P02776 101 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 JUNP05412 331 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SBK3P0C264 359 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CTSAP10619 480 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CD8BP10966 210 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CCL5P13501 91 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CYP4B1P13584 511 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PNLIPP16233 465 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FGF8P55075 233 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MAZP56270 477 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SEMA3BQ13214 749 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TRAM1Q15629 374 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GPR68Q15743 365 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TRIM60Q495X7 471 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 OTUD1Q5VV17 481 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PLCXD3Q63HM9 321 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ESRP1Q6NXG1 681 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FAHD2BQ6P2I3 314 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SPNS3Q6ZMD2 512 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TAS1R1Q7RTX1 841 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM151AQ8N4L1 468 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 NPWQ8N729 165 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FRMD1Q8N878 549 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 C2CD4AQ8NCU7 369 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CYGBQ8WWM9 190 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FAHD2AQ96GK7 314 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SH3YL1Q96HL8 342 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 KLHDC3Q9BQ90 382 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ADI1Q9BV57 179 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 RTN4RQ9BZR6 473 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SLCO5A1Q9H2Y9 848 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 HCFC1R1Q9NWW0 138 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 AHSPQ9NZD4 102 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 RNF11Q9Y3C5 154 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 KLK4Q9Y5K2 254 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MRPS18BQ9Y676 258 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 PRORSD1PA6NEY8 169 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 A8MT66 165 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 HAS3O00219 553 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FGF10O15520 208 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GPR32O75388 356 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GOT2P00505 430 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 KCNE1P15382 129 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FOSL2P15408 326 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 FUT1P19526 365 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GNPDA1P46926 289 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CCR6P51684 374 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 LILRA4P59901 499 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 GPR33Q49SQ1 333 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC35D3Q5M8T2 416 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 HFE2Q6ZVN8 426 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 THOC6Q86W42 341 aaKnown RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 AMIGO1Q86WK6 493 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ADGRG3Q86Y34 549 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM86AQ8N2M4 240 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CBR4Q8N4T8 237 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 DHRSXQ8N5I4 330 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CYB561A3Q8NBI2 242 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF420Q8TAQ5 688 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 CENPNQ96H22 339 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MYO19Q96H55 970 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC45A3Q96JT2 553 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 OR14A2Q96R54 314 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SIK2Q9H0K1 926 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms