RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PLA1AQ53H76 456 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FAM205BPQ63HN1 556 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FAM92BQ6ZTR7 304 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 LRRTM4Q86VH4 590 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 DNAJA4Q8WW22 397 aaPredicted RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 PRRC1Q96M27 445 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 ZFP64Q9NPA5 681 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FAM240BA0A1B0GVZ2 78 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 SURF4O15260 269 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 EIF4EP06730 217 aaKnown RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 SLC6A1P30531 599 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 UQCRC1P31930 480 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FXYD6P3P58550 94 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 KLHL22Q53GT1 634 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 C6orf132Q5T0Z8 1188 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 RAET1GQ6H3X3 334 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 SLC27A4Q6P1M0 643 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 LILRA6Q6PI73 481 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 SLC36A4Q6YBV0 504 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 ZNF607Q96SK3 696 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 LGR4Q9BXB1 951 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 NIPAL2Q9H841 368 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 SLC28A3Q9HAS3 691 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 NEUROD4Q9HD90 331 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 PAK6Q9NQU5 681 aaPredicted RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 TRPC4Q9UBN4 977 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 CBLCQ9ULV8 474 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 E9PI62 339 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 FABP7O15540 132 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 TPD52L2O43399 206 aaKnown RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 PROM1O43490 865 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 HMGN2P05204 90 aaKnown RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 LASP1Q14847 261 aaKnown RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 FCN2Q15485 313 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 KIAA1211LQ6NV74 962 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 KLBQ86Z14 1044 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 PEX5LQ8IYB4 626 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 ELMOD2Q8IZ81 293 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 DIO2Q92813 273 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 ARSGQ96EG1 525 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 CNRIP1Q96F85 164 aaPredicted RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 DPH7Q9BTV6 452 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 HEXA-AS1Q9H8Q6 139 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 P2RX2Q9UBL9 471 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 SGK494L7N484 410 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 CHP2O43745 196 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 C8orf89P0DMQ9 161 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ERGP11308 486 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 CXCL3P19876 107 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 NDUFAF5Q5TEU4 345 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 TRIQKQ629K1 86 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ASB18Q6ZVZ8 466 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 PLCZ1Q86YW0 608 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 RASSF5Q8WWW0 418 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ABHD1Q96SE0 405 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 GTPBP2Q9BX10 602 aaKnown RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 DDX31Q9H8H2 851 aaKnown RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 ZCCHC3Q9NUD5 404 aaKnown RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 A0A0A6YYD5 115 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 CENPVL1A0A0U1RR11 272 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 FCMRO60667 390 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 SCO1O75880 301 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 RECQLP46063 649 aaPredicted RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 GPR4P46093 362 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 TEAD2Q15562 447 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 TCEAL5Q5H9L2 206 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ARRDC3Q96B67 414 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 C17orf62Q9BQA9 187 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 TRIM45Q9H8W5 580 aaPredicted RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 MED20Q9H944 212 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ZDHHC4Q9NPG8 344 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 GSAPA4D1B5 854 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ZSCAN5BA6NJL1 495 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 KLF4O43474 513 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 HYAL3O43820 417 aaPredicted RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 SH3BP5O60239 455 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 SLC43A1O75387 559 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 IGHA1P01876 353 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 C8AP07357 584 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 ZGLP1P0C6A0 271 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 TIGD4Q8IY51 512 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
NUP98-204ENST00000397004 ZNF558Q96NG5 402 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 SLC38A1Q9H2H9 487 aa13.05□□□□□ -0.32
NUP98-204ENST00000397004 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
NUP98-204ENST00000397004 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms