RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 FZD5Q13467 585 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 TMEM44Q2T9K0 475 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 EOGTQ5NDL2 527 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 TYW3Q6IPR3 259 aaKnown RBP12.51□□□□□ -0.41
TRIM40-207ENST00000396581 TMEM107Q6UX40 140 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 NR4A3Q92570 626 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 SMARCD2Q92925 531 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
TRIM40-207ENST00000396581 MRGPRX3Q96LB0 322 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 DHRS9Q9BPW9 319 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 SPATA5L1Q9BVQ7 753 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 OR51I1Q9H343 314 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 FOLH1BQ9HBA9 442 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 ADAM29Q9UKF5 820 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 ATG2AQ2TAZ0 1938 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 C12orf71A8MTZ7 269 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 CHST10O43529 356 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 HRO43593 1189 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 APOL3O95236 402 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 VIPR2P41587 438 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 SPDYE7PQ495Y7 208 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 PLA1AQ53H76 456 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 MARCH9Q86YJ5 346 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ANKRD53Q8N9V6 530 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 LRIG1Q96JA1 1093 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 SLC35G5Q96KT7 338 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 COQ10AQ96MF6 247 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 GPR137Q96N19 417 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 SLC38A2Q96QD8 506 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 PELI2Q9HAT8 420 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 WASH6PQ9NQA3 447 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 CLCA2Q9UQC9 943 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 HSPB11Q9Y547 144 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 COL4A3Q01955 1670 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 LOC102723532A0A0G2JNH3 316 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 LOC105371267A0A1B0GV96 52 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ISM1B1AKI9 464 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 RTCAO00442 366 aaKnown RBP12.5□□□□□ -0.41
TRIM40-207ENST00000396581 TMPRSS11DO60235 418 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 CISD3P0C7P0 127 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 PPP2R1BP30154 601 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
TRIM40-207ENST00000396581 AVPR1BP47901 424 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
TRIM40-207ENST00000396581 BDH1Q02338 343 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 FUT5Q11128 374 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ANGPT1Q15389 498 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 FAM214AQ32MH5 1076 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ZBTB37Q5TC79 503 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 BICRALQ6AI39 1079 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ZFP41Q8N8Y5 198 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 UCN3Q969E3 161 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 DTD2Q96FN9 168 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 F2RL3Q96RI0 385 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 CITED4Q96RK1 184 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 HDHD5Q9BXW7 423 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 ZCCHC2Q9C0B9 1178 aaKnown RBP12.5□□□□□ -0.41
TRIM40-207ENST00000396581 BTBD1Q9H0C5 482 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 PIGUQ9H490 435 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 MED17Q9NVC6 651 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 OBP2AQ9NY56 170 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 GPR52Q9Y2T5 361 aa12.5□□□□□ -0.41
TRIM40-207ENST00000396581 PLXND1Q9Y4D7 1925 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 C5orf42Q9H799 3197 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 C7orf66A4D0T2 115 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SYT5O00445 386 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ADH1CP00326 375 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 CHRM4P08173 479 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 NR2F1P10589 423 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ADH5P11766 374 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 IFNGR2P38484 337 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 OMPP47874 163 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ATP12AP54707 1039 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 CDH11P55287 796 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 CTBP2P56545 445 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SNRPD2P62316 118 aaKnown RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 TRA2BP62995 288 aaKnown RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 MADCAM1Q13477 382 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 NFE2L1Q14494 772 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 PRAMEF8Q5VWM4 474 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 PRAMEF7Q5VXH5 474 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 KLHL36Q8N4N3 616 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 OR5D16Q8NGK9 328 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 XAGE5Q8WWM1 108 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 RFKQ969G6 155 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 EXOSC8Q96B26 276 aaKnown RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 CAMK1GQ96NX5 476 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms