RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZNF705BP0CI00 300 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 FPR1P21462 350 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 CCR1P32246 355 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 CCR7P32248 378 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 EIF1P41567 113 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 OR1G1P47890 313 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 BPIFB3P59826 476 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 UBE2MP61081 183 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 SMAD2Q15796 467 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 SV2CQ496J9 727 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 ARTNQ5T4W7 220 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 MEDAGQ5VYS4 303 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 VHLLQ6RSH7 139 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 GPRIN3Q6ZVF9 776 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 GPAT4Q86UL3 456 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 RNF130Q86XS8 419 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 FAM46DQ8NEK8 389 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 OR2A12Q8NGT7 310 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 OR4K3Q96R72 315 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TTTY10Q9BZA0 68 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 C1orf109Q9NX04 203 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 DNAJB11Q9UBS4 358 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TINAGQ9UJW2 476 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 PTPRDP23468 1912 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 RGS14O43566 566 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 SLC43A1O75387 559 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 CDC123O75794 336 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 CH25HO95992 272 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 QDPRP09417 244 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 RBM34P42696 430 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 DAOAP59103 153 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 NKX6-1P78426 367 aaPredicted RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 SORDQ00796 357 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 ARHGEF7Q14155 803 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 GPR176Q14439 515 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TCEAL5Q5H9L2 206 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 ACER2Q5QJU3 275 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 SDHAF4Q5VUM1 108 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 ARL9Q6T311 187 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 UNQ6126/PRO20091Q6UXV3 157 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 MTSS1LQ765P7 747 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 LRRTM1Q86UE6 522 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 OR14A16Q8NHC5 309 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 STYXQ8WUJ0 223 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 UPRTQ96BW1 309 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 DUS3LQ96G46 650 aaKnown RBP7.98□□□□□ -1.13
NDE1-202ENST00000396355 SCMH1Q96GD3 660 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 PCED1BQ96HM7 432 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 BRINP2Q9C0B6 783 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 TMEM248Q9NWD8 314 aa7.98□□□□□ -1.13
NDE1-202ENST00000396355 C5orf51A6NDU8 294 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 TCF21O43680 179 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 S100A11P31949 105 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 CHI3L1P36222 383 aaPredicted RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 RPL4P36578 427 aaKnown RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 FOXA1P55317 472 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 MEF2AQ02078 507 aaPredicted RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 SCAPQ12770 1279 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 ASAH1Q13510 395 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 C4orf17Q53FE4 359 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 ACTBL2Q562R1 376 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 LYPD4Q6UWN0 246 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.97□□□□□ -1.13
NDE1-202ENST00000396355 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 KRT77Q7Z794 578 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 CCDC116Q8IYX3 515 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 OR9A2Q8NGT5 310 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 OR8S1Q8NH09 359 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 OR52P1PQ8NH57 321 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 ZCCHC10Q8TBK6 192 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 KCTD13Q8WZ19 329 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 ISOC2Q96AB3 205 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 MS4A3Q96HJ5 214 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 FCRL1Q96LA6 429 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 ACKR4Q9NPB9 350 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 LAMP5Q9UJQ1 280 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 EXO1Q9UQ84 846 aaKnown RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 SDK1Q7Z5N4 2213 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 NLRC5Q86WI3 1866 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 GNG14A0A1W2PPG7 69 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 UPK3BL1B0FP48 263 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 HHLA1C9JL84 531 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 UPK3BL2E5RIL1 263 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 E7EQ34 232 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 GOSR2O14653 212 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 GPX5O75715 221 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 AKR7A3O95154 331 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 TSPAN12O95859 305 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 HPRP00739 348 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 IFNA17P01571 189 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 SRPRAP08240 638 aaKnown RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 FGF4P08620 206 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 ALDOCP09972 364 aaKnown RBP7.97□□□□□ -1.13
NDE1-202ENST00000396355 RAB6AP20340 208 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 POU3F4P49335 361 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 DSC2Q02487 901 aa7.97□□□□□ -1.13
NDE1-202ENST00000396355 ZRANB3Q5FWF4 1079 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms