RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 MICAQ29983 383 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 COL28A1Q2UY09 1125 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 DUS1LQ6P1R4 473 aaKnown RBP5.18□□□□□ -1.58
VPS13C-204ENST00000395898 ANKLE1Q8NAG6 615 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 SYT14Q8NB59 555 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 OR6C4Q8NGE1 309 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 WDR20Q8TBZ3 569 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 TRMT2BQ96GJ1 504 aaKnown RBP5.18□□□□□ -1.58
VPS13C-204ENST00000395898 PBDC1Q9BVG4 233 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 PINK1Q9BXM7 581 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 GORASP2Q9H8Y8 452 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 KCNK12Q9HB15 430 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 ACSL6Q9UKU0 697 aa5.18□□□□□ -1.58
VPS13C-204ENST00000395898 LOC102723532A0A0G2JNH3 316 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 hCG_1807616A0A1W2PRN6 198 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 F5H0A9 414 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF865P0CJ78 1059 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 BMP2P12643 396 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 MLLT10P55197 1068 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 WNT4P56705 351 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CTXN1P60606 82 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 LRRC37A5PQ49AS3 106 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PRAMEF8Q5VWM4 474 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PRAMEF7Q5VXH5 474 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CARD17Q5XLA6 110 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 HMBOX1Q6NT76 420 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PGM2L1Q6PCE3 622 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 XKR5Q6UX68 686 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 IL17RCQ8NAC3 791 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CENPOQ9BU64 300 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 NTMT1Q9BV86 223 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 MARCH4Q9P2E8 410 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SLCO3A1Q9UIG8 710 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ANKRD28O15084 1053 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 STSP08842 583 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ADH7P40394 386 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RTP2Q5QGT7 225 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 FAM3CQ92520 227 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 FAM46BQ96A09 425 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 HYLS1Q96M11 299 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 MYADMQ96S97 322 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 STRA6Q9BX79 667 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SDR39U1Q9NRG7 319 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR6C2Q9NZP2 312 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ST14Q9Y5Y6 855 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PLCH1Q4KWH8 1693 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 POLR2AP24928 1970 aaKnown RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 WASH4PA8MWX3 477 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TMX2-CTNND1H3BSU7 103 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 NDUFB2O95178 105 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CSF2P04141 144 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 NAA10P41227 235 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TNFRSF4P43489 277 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PON2Q15165 354 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 AWAT2Q6E213 333 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RTL6Q6ICC9 239 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 VWA5B2Q8N398 1253 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR8K3Q8NH51 312 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SNAPC3Q92966 411 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ARL5BQ96KC2 179 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 KLHL15Q96M94 604 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RGCCQ9H4X1 137 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PDLIM7Q9NR12 457 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 MGAT4CQ9UBM8 478 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 BTNL2Q9UIR0 455 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TRIP12Q14669 1992 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 A6NLC8 198 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SOX4Q06945 474 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TSPAN33Q86UF1 283 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 WDSUB1Q8N9V3 476 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CD300LFQ8TDQ1 290 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 C17orf50Q8WW18 174 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 AP1S3Q96PC3 154 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 NRAPQ86VF7 1730 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 J3QRK9 145 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR2T1O43869 369 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 UQCRC1P31930 480 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 JAG1P78504 1218 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RGNQ15493 299 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF423Q2M1K9 1284 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 NKAPLQ5M9Q1 402 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF648Q5T619 568 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 LEG1Q6P5S2 330 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 DLK2Q6UY11 383 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 VTCN1Q7Z7D3 282 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CPXM2Q8N436 756 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SLC7A13Q8TCU3 470 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM174Q8WUU8 243 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TCEAL4Q96EI5 215 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF778Q96MU6 729 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ASB4Q9Y574 426 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 A0A0J9YY10 115 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 A0A1W2PPW3 197 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 KIAA0355O15063 1070 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 LATO43561 262 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SYT7O43581 403 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ONECUT3O60422 494 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 MT-CO2P00403 227 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PROS1P07225 676 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 HAGHLQ6PII5 290 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms