RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 SOX18P35713 384 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF81P51508 661 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 NTRK2Q16620 822 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 ARMC6Q6NXE6 501 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 VASH1Q7L8A9 365 aaPredicted RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 KIAA1958Q8N8K9 716 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 VN1R2Q8NFZ6 395 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 LMAN2LQ9H0V9 348 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 TMEM138Q9NPI0 162 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 ALG5Q9Y673 324 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 POLR1CO15160 346 aaPredicted RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 CTSAP10619 480 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 NAA10P41227 235 aaPredicted RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 CDK10Q15131 360 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 TCTN1Q2MV58 587 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 FRRS1Q6ZNA5 592 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 ACOT4Q8N9L9 421 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 OR6F1Q8NGZ6 308 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 AKAP1Q92667 903 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 GALNT9Q9HCQ5 603 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 UQCRC1P31930 480 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 TM4SF4P48230 202 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 PLK5Q496M5 336 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF362Q5T0B9 420 aaPredicted RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 C18orf63Q68DL7 685 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 FAM83HQ6ZRV2 1179 aaPredicted RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 PLA2G15Q8NCC3 412 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 UCN3Q969E3 161 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 DNAJA3Q96EY1 480 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 PAWRQ96IZ0 340 aaKnown RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 DNMT3BQ9UBC3 853 aaKnown RBP15.19■□□□□ 0.02
PCDH1-203ENST00000394536 AP1M2Q9Y6Q5 423 aa15.19■□□□□ 0.02
PCDH1-203ENST00000394536 A0A1W2PP55 124 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 VEGFDO43915 354 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 RPP14O95059 124 aaKnown RBP15.18■□□□□ 0.02
PCDH1-203ENST00000394536 EPCAMP16422 314 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 HSD17B2P37059 387 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 RAB40BQ12829 278 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 INSL4Q14641 139 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 RERGQ96A58 199 aaPredicted RBP15.18■□□□□ 0.02
PCDH1-203ENST00000394536 SRMSQ9H3Y6 488 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 NLGN3Q9NZ94 848 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 GREB1Q4ZG55 1949 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 A0A087WUU8 490 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 TRIM64BA6NI03 449 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 RASGRP1O95267 797 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 CD3GP09693 182 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 CSF3P09919 207 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 ACP2P11117 423 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 ACTR1BP42025 376 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 ACTR1AP61163 376 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 ODF4Q2M2E3 257 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 LCTLQ6UWM7 567 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 PRICKLE2Q7Z3G6 844 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 NRSN1Q8IZ57 195 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 GPR32P1Q8NGA4 272 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 OR2L2Q8NH16 312 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 TMEM163Q8TC26 289 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 WFIKKN2Q8TEU8 576 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 SLC25A46Q96AG3 418 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 PRRC1Q96M27 445 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 POLDIP3Q9BY77 421 aaKnown RBP15.18■□□□□ 0.02
PCDH1-203ENST00000394536 A0A0G2JMZ2 1700 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 LRRC37A2A6NM11 1700 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 EMC8O43402 210 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 IFNGP01579 166 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF155Q12901 538 aaPredicted RBP15.18■□□□□ 0.02
PCDH1-203ENST00000394536 FGFBP1Q14512 234 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 P2RY14Q15391 338 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 FAM205BPQ63HN1 556 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
PCDH1-203ENST00000394536 TTLQ8NG68 377 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 LRRC20Q8TCA0 184 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 KATNB1Q9BVA0 655 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 MS4A8Q9BY19 250 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 DPAGT1Q9H3H5 408 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 SLAMF7Q9NQ25 335 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 FTSJ1Q9UET6 329 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 STOML2Q9UJZ1 356 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 IKZF2Q9UKS7 526 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 SLC7A7Q9UM01 511 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF236Q9UL36 1845 aa15.18■□□□□ 0.02
PCDH1-203ENST00000394536 AGAP14A8MT82 685 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 HEPACAM2A8MVW5 462 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 GABRPO00591 440 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SOCS6O14544 535 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 FFAR1O14842 300 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 NUDT14O95848 222 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 IFNA16P05015 189 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SDHBP21912 280 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SLC1A3P43003 542 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SNRPGP62308 76 aaKnown RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 LHX8Q68G74 356 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ANKRD54Q6NXT1 300 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 OR4C15Q8NGM1 316 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ARRDC3Q96B67 414 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 CACNG6Q9BXT2 260 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 RBCK1Q9BYM8 510 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ZDHHC5Q9C0B5 715 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 DIMT1Q9UNQ2 313 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms