RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 EQTNQ9NQ60 294 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 MAPRE3Q9UPY8 281 aa28.09■■■□□ 2.09
CMTM4-202ENST00000394106 C15orf38-AP3S2A0A0A6YYH1 394 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 PTPN6P29350 595 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 SLC1A6P48664 564 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 PMPCAQ10713 525 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 ZNF630Q2M218 657 aaPredicted RBP28.08■■■□□ 2.09
CMTM4-202ENST00000394106 HHATQ5VTY9 493 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 IL23RQ5VWK5 629 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 SZRD1Q7Z422 152 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 C20orf27Q9GZN8 174 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 RAP2CQ9Y3L5 183 aa28.08■■■□□ 2.09
CMTM4-202ENST00000394106 SNPHO15079 494 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 SCAMP2O15127 329 aaKnown RBP28.07■■■□□ 2.08
CMTM4-202ENST00000394106 HPNP05981 417 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 GRK2P25098 689 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 PNLIPRP2P54317 469 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 NUP107P57740 925 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 PTGR1Q14914 329 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 BEND6Q5SZJ8 279 aaPredicted RBP28.07■■■□□ 2.08
CMTM4-202ENST00000394106 OR7A2PQ8NGA2 310 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 CA5BP1Q8WTZ4 195 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 RND1Q92730 232 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 Q9N2J8 555 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 SERHLQ9NQF3 203 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 ATP6V1HQ9UI12 483 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 CBLCQ9ULV8 474 aa28.07■■■□□ 2.08
CMTM4-202ENST00000394106 NBPF19A0A087WUL8 3843 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 IFI6P09912 130 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 PRPS2P11908 318 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 DDX5P17844 614 aaKnown RBP28.06■■■□□ 2.08
CMTM4-202ENST00000394106 FRKP42685 505 aaPredicted RBP28.06■■■□□ 2.08
CMTM4-202ENST00000394106 PRKAG1P54619 331 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 MRPS22P82650 360 aaKnown RBP28.06■■■□□ 2.08
CMTM4-202ENST00000394106 STX3Q13277 289 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 GAB1Q13480 694 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 CYP27C1Q4G0S4 372 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 EIPR1Q53HC9 387 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 SORT1Q99523 831 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 ACSS1Q9NUB1 689 aaPredicted RBP28.06■■■□□ 2.08
CMTM4-202ENST00000394106 SLC6A5Q9Y345 797 aa28.06■■■□□ 2.08
CMTM4-202ENST00000394106 WDR1O75083 606 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 CYP4B1P13584 511 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 RPL3P39023 403 aaKnown RBP28.05■■■□□ 2.08
CMTM4-202ENST00000394106 DECR1Q16698 335 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 WIPI1Q5MNZ9 446 aaPredicted RBP28.05■■■□□ 2.08
CMTM4-202ENST00000394106 B3GNT6Q6ZMB0 384 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 ACAD11Q709F0 780 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 MGARPQ8TDB4 240 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 PHF3Q92576 2039 aaKnown RBP28.05■■■□□ 2.08
CMTM4-202ENST00000394106 LMF2Q9BU23 707 aaKnown RBP28.05■■■□□ 2.08
CMTM4-202ENST00000394106 CHST11Q9NPF2 352 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 RNF6Q9Y252 685 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 EIF3LQ9Y262 564 aaKnown RBP28.05■■■□□ 2.08
CMTM4-202ENST00000394106 EPB41L3Q9Y2J2 1087 aaPredicted RBP28.05■■■□□ 2.08
CMTM4-202ENST00000394106 FAM215AQ9Y5M1 114 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 WIF1Q9Y5W5 379 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 UNC79Q9P2D8 2635 aa28.05■■■□□ 2.08
CMTM4-202ENST00000394106 TMEM120BA0PK00 339 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 GABRA3P34903 492 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 RFX3P48380 749 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 RPL14P50914 215 aaKnown RBP28.04■■■□□ 2.08
CMTM4-202ENST00000394106 C1orf185Q5T7R7 199 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 RTL6Q6ICC9 239 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 YRDCQ86U90 279 aaKnown RBP28.04■■■□□ 2.08
CMTM4-202ENST00000394106 KRTCAP2Q8N6L1 136 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 WDSUB1Q8N9V3 476 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 NUP43Q8NFH3 380 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 OR10Q1Q8NGQ4 319 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 TTYH2Q9BSA4 534 aa28.04■■■□□ 2.08
CMTM4-202ENST00000394106 HNRNPRO43390 633 aaKnown RBP28.03■■■□□ 2.08
CMTM4-202ENST00000394106 SNUPNO95149 360 aaKnown RBP28.03■■■□□ 2.08
CMTM4-202ENST00000394106 LAMP1P11279 417 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 MAD2L1Q13257 205 aaPredicted RBP28.03■■■□□ 2.08
CMTM4-202ENST00000394106 CPTPQ5TA50 214 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 CCDC71Q8IV32 467 aaPredicted RBP28.03■■■□□ 2.08
CMTM4-202ENST00000394106 FAM83FQ8NEG4 500 aaPredicted RBP28.03■■■□□ 2.08
CMTM4-202ENST00000394106 CEP70Q8NHQ1 597 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 NUDT8Q8WV74 236 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 ASB5Q8WWX0 329 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 MARVELD3Q96A59 401 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 C3orf14Q9HBI5 128 aa28.03■■■□□ 2.08
CMTM4-202ENST00000394106 MRTO4Q9UKD2 239 aaKnown RBP28.03■■■□□ 2.08
CMTM4-202ENST00000394106 SCO2O43819 266 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 CBR3O75828 277 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 GLI4P10075 376 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 G6PDP11413 515 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 GABRA1P14867 456 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 MAGOHP61326 146 aaKnown RBP28.02■■■□□ 2.08
CMTM4-202ENST00000394106 CRYZQ08257 329 aaKnown RBP28.02■■■□□ 2.08
CMTM4-202ENST00000394106 BST1Q10588 318 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 OR5M10Q6IEU7 315 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 PLCZ1Q86YW0 608 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 FBXO30Q8TB52 745 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 GPR151Q8TDV0 419 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 TIMP4Q99727 224 aa28.02■■■□□ 2.08
CMTM4-202ENST00000394106 A0A1W2PRB8 838 aa28.01■■■□□ 2.07
CMTM4-202ENST00000394106 GXYLT2A0PJZ3 443 aa28.01■■■□□ 2.07
CMTM4-202ENST00000394106 TTC36A6NLP5 189 aa28.01■■■□□ 2.07
CMTM4-202ENST00000394106 C19orf84I3L1E1 186 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms