RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 PIP5K1AQ99755 562 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
CUX1-204ENST00000393824 ASB8Q9H765 288 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SLCO1C1Q9NYB5 712 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 GLS2Q9UI32 602 aa10.49□□□□□ -0.73
CUX1-204ENST00000393824 SLC30A4O14863 429 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 YY2O15391 372 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 HRO43593 1189 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 AKAP8O43823 692 aaKnown RBP10.48□□□□□ -0.73
CUX1-204ENST00000393824 HPGDSO60760 199 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 DHFRP00374 187 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 GAAP10253 952 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 STOMP27105 288 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 SPINT3P49223 89 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 INPP1P49441 399 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ATP12AP54707 1039 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ZNF91Q05481 1191 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 RPA4Q13156 261 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ILKQ13418 452 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 MADCAM1Q13477 382 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 TPBGQ13641 420 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ZNF273Q14593 569 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 SNAPC1Q16533 368 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 C3orf38Q5JPI3 329 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ANXA8L1Q5VT79 327 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 CD276Q5ZPR3 534 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 FRG2Q64ET8 278 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ZNF770Q6IQ21 691 aaPredicted RBP10.48□□□□□ -0.73
CUX1-204ENST00000393824 NUDT18Q6ZVK8 323 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ERN2Q76MJ5 926 aaKnown RBP10.48□□□□□ -0.73
CUX1-204ENST00000393824 CLDN19Q8N6F1 224 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 FRMD1Q8N878 549 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 OR52H1Q8NGJ2 320 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 ST8SIA4Q92187 359 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 TM9SF4Q92544 642 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 FBXW5Q969U6 566 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 PDXPQ96GD0 296 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 APOLD1Q96LR9 279 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 FRG2BQ96QU4 278 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 TSR3Q9UJK0 312 aaKnown RBP10.48□□□□□ -0.73
CUX1-204ENST00000393824 GSTK1Q9Y2Q3 226 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 DNMT3AQ9Y6K1 912 aaPredicted RBP10.48□□□□□ -0.73
CUX1-204ENST00000393824 PRSS21Q9Y6M0 314 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 LRRK1Q38SD2 2015 aa10.48□□□□□ -0.73
CUX1-204ENST00000393824 UGDHO60701 494 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 GADD45GO95257 159 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 WDPCPO95876 746 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 PDGFBP01127 241 aaPredicted RBP10.47□□□□□ -0.73
CUX1-204ENST00000393824 C8GP07360 202 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 NDUFV2P19404 249 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 VIPR1P32241 457 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 SLC6A12P48065 614 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 RPIAP49247 311 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 POLR2LP62875 67 aaKnown RBP10.47□□□□□ -0.73
CUX1-204ENST00000393824 PUDPQ08623 228 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 GPR176Q14439 515 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 UBXN2BQ14CS0 331 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 OCLNQ16625 522 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 CD200R1LQ6Q8B3 271 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 PAQR6Q6TCH4 344 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 TFAP2EQ6VUC0 442 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 RTL4Q6ZR62 310 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 QSOX2Q6ZRP7 698 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 FAM92BQ6ZTR7 304 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 DPPA4Q7L190 304 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 CAMKMTQ7Z624 323 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 SYT12Q8IV01 421 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 NAGSQ8N159 534 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 HDDC3Q8N4P3 179 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 OR8J1Q8NGP2 316 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 FANK1Q8TC84 345 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 SLC22A8Q8TCC7 542 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 PTP4A1Q93096 173 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 TMEM203Q969S6 136 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 COPS8Q99627 209 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 SLC12A9Q9BXP2 914 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 MCCC2Q9HCC0 563 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 ISYNA1Q9NPH2 558 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 RDH8Q9NYR8 311 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 KCMF1Q9P0J7 381 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 CPNE7Q9UBL6 633 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 KIF25Q9UIL4 384 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 RUVBL1Q9Y265 456 aaKnown RBP10.47□□□□□ -0.73
CUX1-204ENST00000393824 KCNMB2Q9Y691 235 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 PRAMEF33A0A0G2JMD5 474 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 J3KTA2 159 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 GTPBP1O00178 669 aaKnown RBP10.47□□□□□ -0.73
CUX1-204ENST00000393824 SLC16A5O15375 505 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 PCDH7O60245 1069 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 PRAMEF10O60809 474 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 SOD1P00441 154 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 S100A6P06703 90 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 ELFN1P0C7U0 828 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 OSMP13725 252 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 COX7A2P14406 83 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 BDKRB1P46663 353 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 B4GALNT1Q00973 533 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms