RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 AQP7O14520 342 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 SH3BGRLO75368 114 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 P04436 131 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 IL6P05231 212 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 ANXA4P09525 319 aaPredicted RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 CD99P14209 185 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 SDC1P18827 310 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 PRPS1L1P21108 318 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 RAP1GDS1P52306 607 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 KCNJ2P63252 427 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 SLC25A3Q00325 362 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 SLC10A1Q14973 349 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 KRTAP21-3Q3LHN1 58 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 TMEM35AQ53FP2 167 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 DEPDC1Q5TB30 811 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 KHDRBS2Q5VWX1 349 aaKnown RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 GALNT18Q6P9A2 607 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 OR4N5Q8IXE1 308 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 ZZZ3Q8IYH5 903 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 GOLM1Q8NBJ4 401 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 OR8K3Q8NH51 312 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 ZNF721Q8TF20 911 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 CADM1Q9BY67 442 aaKnown RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 OR51B5Q9H339 312 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 CCM2LQ9NUG4 571 aaPredicted RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 SPRR3Q9UBC9 169 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 PRPF19Q9UMS4 504 aaKnown RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 DLGAP4Q9Y2H0 992 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 ATG4BQ9Y4P1 393 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 ZNF469Q96JG9 3925 aaPredicted RBP17.12■□□□□ 0.33
SNCB-202ENST00000393693 DNAJC13O75165 2243 aa17.12■□□□□ 0.33
SNCB-202ENST00000393693 GNG14A0A1W2PPG7 69 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 ANKRD28O15084 1053 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 PCDH7O60245 1069 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 ENDOUP21128 410 aaKnown RBP17.11■□□□□ 0.33
SNCB-202ENST00000393693 CPOXP36551 454 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 RPL3P39023 403 aaKnown RBP17.11■□□□□ 0.33
SNCB-202ENST00000393693 GSTM5P46439 218 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 ARFIP1P53367 373 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 TGM3Q08188 693 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 HYAL4Q2M3T9 481 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 DPY19L1Q2PZI1 675 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 VPS26BQ4G0F5 336 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 C1orf185Q5T7R7 199 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 OPN5Q6U736 354 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 ARSKQ6UWY0 536 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 DGAT2L6Q6ZPD8 337 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 WDR53Q7Z5U6 358 aaPredicted RBP17.11■□□□□ 0.33
SNCB-202ENST00000393693 DEFB107AQ8IZN7 70 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 PGAM4Q8N0Y7 254 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 SRFBP1Q8NEF9 429 aaKnown RBP17.11■□□□□ 0.33
SNCB-202ENST00000393693 OR5L2Q8NGL0 311 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 DOK4Q8TEW6 326 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 RGMAQ96B86 450 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 SGCZQ96LD1 299 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 TSSK3Q96PN8 268 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 EXO5Q9H790 373 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 EML6Q6ZMW3 1958 aa17.11■□□□□ 0.33
SNCB-202ENST00000393693 TRGV5A0A0B4J1U4 118 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 SYNDIG1LA6NDD5 238 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 HRKO00198 91 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 SUSD5O60279 629 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 EEDO75530 441 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 CTAG2O75638 210 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 NPPAP01160 153 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 ATP5A1P25705 553 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 SERTAD2Q14140 314 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 PTGR1Q14914 329 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 PIGGQ5H8A4 983 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 WLSQ5T9L3 541 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 C6orf163Q5TEZ5 329 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 ACOT4Q8N9L9 421 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 FBXO27Q8NI29 283 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 PPWD1Q96BP3 646 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 TESCQ96BS2 214 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 SARAFQ96BY9 339 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 C11orf24Q96F05 449 aaPredicted RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 PRPF18Q99633 342 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 HOPXQ9BPY8 73 aaPredicted RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 THTPAQ9BU02 230 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 EBPLQ9BY08 206 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 WDR41Q9HAD4 459 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 SLC24A3Q9HC58 644 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 LYRM4Q9HD34 91 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 BAIAP2L1Q9UHR4 511 aa17.1■□□□□ 0.33
SNCB-202ENST00000393693 WBP11Q9Y2W2 641 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 PRRC2AP48634 2157 aaKnown RBP17.1■□□□□ 0.33
SNCB-202ENST00000393693 SAP18O00422 153 aaKnown RBP17.09■□□□□ 0.33
SNCB-202ENST00000393693 FBP2O00757 339 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 FGF17O60258 216 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 WDR1O75083 606 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 CIB2O75838 187 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 DDX5P17844 614 aaKnown RBP17.09■□□□□ 0.33
SNCB-202ENST00000393693 IL12AP29459 219 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms