RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 VPS4AQ9UN37 437 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 OR10H1Q9Y4A9 318 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CSAG2Q9Y5P2 127 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 CPAMD8Q8IZJ3 1885 aa6.23□□□□□ -1.41
UBBP1-201ENST00000392399 NUP214P35658 2090 aaPredicted RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 TNRC6AQ8NDV7 1962 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 RNF103-CHMP3A0A140T963 221 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 A0A1W2PP18 115 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ASPDHA6ND91 283 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 LCE2BO14633 110 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ASNA1O43681 348 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 PEX1O43933 1283 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 HS6ST1O60243 411 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SNX3O60493 162 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 TSPAN2O60636 221 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 REM1O75628 298 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 C1QL1O75973 258 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ANP32DO95626 131 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 KRT75O95678 551 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 IL33O95760 270 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 AK1P00568 194 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 F10P00742 488 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 PRB1P04280 392 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 EFNA1P20827 205 aaPredicted RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 MATN1P21941 496 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 IL12BP29460 328 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SOAT1P35610 550 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ZFP36L2P47974 494 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 CLK3P49761 638 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SEC24CP53992 1094 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 CORO7P57737 925 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 PLCXD2Q0VAA5 305 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 LASP1Q14847 261 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 MAPRE2Q15555 327 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 INPP5JQ15735 1006 aaPredicted RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 AGKQ53H12 422 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 AP1ARQ63HQ0 302 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SLC30A6Q6NXT4 461 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 FAM180AQ6UWF9 173 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 NPSR1Q6W5P4 371 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 BNC2Q6ZN30 1099 aaPredicted RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF621Q6ZSS3 439 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SZRD1Q7Z422 152 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SPATA21Q7Z572 469 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 YTHDF3Q7Z739 585 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 PIGWQ7Z7B1 504 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF605Q86T29 641 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ANKRD46Q86W74 232 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SULF2Q8IWU5 870 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 FBXW8Q8N3Y1 598 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 CISD2Q8N5K1 135 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 BCORP1Q8N888 145 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ZFP62Q8NB50 900 aaPredicted RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SLC16A11Q8NCK7 471 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 FAM13CQ8NE31 585 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 OR9I1Q8NGQ6 314 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 FAM110BQ8TC76 370 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SPPL2AQ8TCT8 520 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 MIPOL1Q8TD10 442 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 GPR151Q8TDV0 419 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 FAR1Q8WVX9 515 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 C10orf82Q8WW14 230 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SLC9A6Q92581 669 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 GTF2H4Q92759 462 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 DIO2Q92813 273 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 TMBIM1Q969X1 311 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SNRNP40Q96DI7 357 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 NEURL3Q96EH8 262 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 DTNBP1Q96EV8 351 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 COL21A1Q96P44 957 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ELAC2Q9BQ52 826 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 FAM173AQ9BQD7 235 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 G6PC3Q9BUM1 346 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 BTBD2Q9BX70 525 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ANGPTL4Q9BY76 406 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 TRIM4Q9C037 500 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 ZNF385DQ9H6B1 395 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SLC52A3Q9NQ40 469 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 EQTNQ9NQ60 294 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 SERHLQ9NQF3 203 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 KLHL1Q9NR64 748 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 EXD2Q9NVH0 621 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 GPATCH2Q9NW75 528 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 THUMPD1Q9NXG2 353 aaKnown RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 MAP10Q9P2G4 905 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 CBLCQ9ULV8 474 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 NDUFAF1Q9Y375 327 aa6.22□□□□□ -1.41
UBBP1-201ENST00000392399 CHCHD2Q9Y6H1 151 aaPredicted RBP6.22□□□□□ -1.41
UBBP1-201ENST00000392399 NBASA2RRP1 2371 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 A0A096LPI6 279 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 C9JVG2 144 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 UGT2B11O75310 529 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 NPPAP01160 153 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 NGFRP08138 427 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 GUSBP08236 651 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 SNRPB2P08579 225 aaKnown RBP6.21□□□□□ -1.42
UBBP1-201ENST00000392399 CCL3P10147 92 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 ACP2P11117 423 aa6.21□□□□□ -1.42
UBBP1-201ENST00000392399 ENDOUP21128 410 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms