RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 RAB33AQ14088 237 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 C3orf38Q5JPI3 329 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TOR2AQ5JU69 321 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 OR11H7Q8NGC8 314 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TEX47Q8TBZ9 253 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TMEM163Q8TC26 289 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 AP3S1Q92572 193 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 OMA1Q96E52 524 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 KLHL31Q9H511 634 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 PGRMC2O15173 223 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 PRODHO43272 600 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TGM5O43548 720 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 ACP5P13686 325 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TPBGQ13641 420 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 KHDRBS2Q5VWX1 349 aaKnown RBP16.91■□□□□ 0.3
ERCC2-201ENST00000391941 SLC27A4Q6P1M0 643 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 IKBIPQ70UQ0 350 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 CCDC28AQ8IWP9 274 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 C9orf62Q8N4C0 152 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 OR13C5Q8NGS8 318 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 HSD17B8Q92506 261 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 KIAA1143Q96AT1 154 aaPredicted RBP16.91■□□□□ 0.3
ERCC2-201ENST00000391941 ZNF607Q96SK3 696 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 MED18Q9BUE0 208 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 MRPL15Q9P015 296 aaKnown RBP16.91■□□□□ 0.3
ERCC2-201ENST00000391941 KLHL21Q9UJP4 597 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 MGAT4AQ9UM21 535 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 CDH10Q9Y6N8 788 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 STK25O00506 426 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 OR1F1O43749 312 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 NCBP2P52298 156 aaKnown RBP eCLIP16.91■□□□□ 0.3
ERCC2-201ENST00000391941 PPP3R1P63098 170 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 KLHL22Q53GT1 634 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 MZT2BQ6NZ67 158 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 TMEM107Q6UX40 140 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 SAMD12Q8N8I0 201 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 OR5P2Q8WZ92 322 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 GCDHQ92947 438 aaPredicted RBP16.91■□□□□ 0.3
ERCC2-201ENST00000391941 ZDHHC5Q9C0B5 715 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 ENKD1Q9H0I2 346 aa16.91■□□□□ 0.3
ERCC2-201ENST00000391941 C6orf106Q9H6K1 298 aaPredicted RBP16.91■□□□□ 0.3
ERCC2-201ENST00000391941 KIF26AQ9ULI4 1882 aaPredicted RBP16.9■□□□□ 0.3
ERCC2-201ENST00000391941 E9PI62 339 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 PDE9AO76083 593 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 CD3GP09693 182 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 SLC16A1P53985 500 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 SLC7A9P82251 487 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 EFNB1P98172 346 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 MAB21L1Q13394 359 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 IZUMO1Q8IYV9 350 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 GPR135Q8IZ08 494 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 ARIH2OSQ8N7S6 290 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 SLC35G5Q96KT7 338 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 ABCG5Q9H222 651 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 CCDC86Q9H6F5 360 aaKnown RBP16.9■□□□□ 0.3
ERCC2-201ENST00000391941 PTGFRNQ9P2B2 879 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 ZNF624Q9P2J8 865 aaPredicted RBP16.9■□□□□ 0.3
ERCC2-201ENST00000391941 KIAA0355O15063 1070 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 LZTS3O60299 673 aaPredicted RBP16.9■□□□□ 0.3
ERCC2-201ENST00000391941 REM1O75628 298 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 HMGN2P05204 90 aaKnown RBP16.9■□□□□ 0.3
ERCC2-201ENST00000391941 SYN1P17600 705 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 CCR6P51684 374 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 TNK1Q13470 666 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 SLC36A4Q6YBV0 504 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 PLA2G15Q8NCC3 412 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 MED30Q96HR3 178 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 MARVELD1Q9BSK0 173 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 HCAR1Q9BXC0 346 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 KLHL1Q9NR64 748 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 STMN3Q9NZ72 180 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 SPEF1Q9Y4P9 236 aa16.9■□□□□ 0.3
ERCC2-201ENST00000391941 A0A1W2PRQ8 180 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 WASH3PC4AMC7 463 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 C4orf51C9J302 202 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 BTN3A3O00478 584 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 ORC5O43913 435 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 FCMRO60667 390 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 HCN1O60741 890 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 UBXN7O94888 489 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 SMIM11AP58511 58 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 FZD5Q13467 585 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 PXDC1Q5TGL8 231 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 POF1BQ8WVV4 589 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 SOSTQ9BQB4 213 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 POLMQ9NP87 494 aaPredicted RBP16.89■□□□□ 0.29
ERCC2-201ENST00000391941 IMP3Q9NV31 184 aaKnown RBP16.89■□□□□ 0.29
ERCC2-201ENST00000391941 SLC9A8Q9Y2E8 581 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 CHST2Q9Y4C5 530 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 TEX46H3BTG2 121 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 CHP2O43745 196 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 LILRB5O75023 590 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 GPR1P46091 355 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 PCBP4P57723 403 aaKnown RBP16.89■□□□□ 0.29
ERCC2-201ENST00000391941 NTHL1P78549 312 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF658BQ4V348 819 aaPredicted RBP16.89■□□□□ 0.29
ERCC2-201ENST00000391941 EOGTQ5NDL2 527 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 UBE3DQ7Z6J8 389 aa16.89■□□□□ 0.29
ERCC2-201ENST00000391941 ZNF485Q8NCK3 441 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms