RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ADCK2Q7Z695 626 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OAFQ86UD1 273 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CREBRFQ8IUR6 639 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CCAR2Q8N163 923 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SIX6OS1Q8N1H7 587 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM252Q8N6L7 170 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF740Q8NDX6 193 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OR6J1Q8NGC5 347 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OR52P1PQ8NH57 321 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SETD6Q8TBK2 473 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FNDC8Q8TC99 324 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FAM151AQ8WW52 585 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RIT1Q92963 219 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 C18orf25Q96B23 403 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 COG3Q96JB2 828 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CXorf58Q96LI9 332 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SSX3Q99909 188 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SPAG8Q99932 426 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 AGPAT1Q99943 283 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TREX2Q9BQ50 279 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 HDHD3Q9BSH5 251 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OSBPL11Q9BXB4 747 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 LRRC2Q9BYS8 371 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FAM129AQ9BZQ8 928 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SPNS1Q9H2V7 528 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TSPY26PQ9H489 355 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ZHX3Q9H4I2 956 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NRN1Q9NPD7 142 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FANCFQ9NPI8 374 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NSMCE4AQ9NXX6 385 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TECRQ9NZ01 308 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF230Q9UIE0 474 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 GPR34Q9UPC5 381 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TP53TG5Q9Y2B4 290 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RPH3AQ9Y2J0 694 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 YTHDF2Q9Y5A9 579 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 LIPGQ9Y5X9 500 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SLCO1B1Q9Y6L6 691 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NUP214P35658 2090 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 MROH7-TTC4A0A0A0MT08 1334 aa0.15□□□□□ -2.38
SNORD28-201ENST00000384706 IGHV7-81A0A0B4J1V7 117 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ILVBLA1L0T0 632 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ANKRD18BA2A2Z9 1011 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 C7orf66A4D0T2 115 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GSAPA4D1B5 854 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ANXA2P2A6NMY6 339 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 RPL36A-HNRNPH2H7BZ11 118 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 J3QKU1 62 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 FOXE1O00358 373 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 LAD1O00515 517 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CTDSPLO15194 276 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 B4GALT5O43286 388 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 EFNA2O43921 213 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SLITRK3O94933 977 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CPNE6O95741 557 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GGPS1O95749 300 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 STARD3NLO95772 234 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 IGHV3-48P01763 117 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 VIMP08670 466 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 STSP08842 583 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 HOXB7P09629 217 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GIPP09681 153 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 TPBGLP0DKB5 382 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 B4GALT1P15291 398 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 MUC1P15941 1255 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SDC1P18827 310 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CYP3A5P20815 502 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ADORA2BP29275 332 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 PRDX3P30048 256 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 NTSP30990 170 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OTX2P32243 289 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 DLSTP36957 453 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 BTDP43251 543 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KIR3DL2P43630 455 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CRISP1P54107 249 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SH3BGRP55822 239 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 NOP14P78316 857 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 IFI35P80217 286 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CDKL1Q00532 357 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 AKAP17AQ02040 695 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 PLOD1Q02809 727 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KLHL30Q0D2K2 578 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 AIMP1Q12904 312 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 BNIP1Q12981 228 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SRSF5Q13243 272 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CAMK2DQ13557 499 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KLF5Q13887 457 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 DPYSQ14117 519 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF273Q14593 569 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KCNJ11Q14654 390 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 MEF2DQ14814 521 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ATXN7L3Q14CW9 347 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 NSDHLQ15738 373 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 AANATQ16613 207 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SHROOM1Q2M3G4 852 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 HKDC1Q2TB90 917 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CFAP221Q4G0U5 840 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GPAT3Q53EU6 434 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CMPK2Q5EBM0 449 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms