RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TTC36A6NLP5 189 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 BIRC5O15392 142 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 NME6O75414 186 aaPredicted RBP15.36■□□□□ 0.05
HMGN4-201ENST00000377575 SKAP2O75563 359 aaPredicted RBP15.36■□□□□ 0.05
HMGN4-201ENST00000377575 ZWINTO95229 277 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 SERPINE1P05121 402 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 BCKDHAP12694 445 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 ARRB2P32121 409 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 PTGDSP41222 190 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 PSG6Q00889 435 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 CYP27C1Q4G0S4 372 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 ANKRD26P1Q6NSI1 321 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 LRIG3Q6UXM1 1119 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 EXOC3L1Q86VI1 746 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 PM20D2Q8IYS1 436 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 OR6Y1Q8NGX8 325 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 CIDECQ96AQ7 238 aaPredicted RBP15.36■□□□□ 0.05
HMGN4-201ENST00000377575 EFHD2Q96C19 240 aaPredicted RBP15.36■□□□□ 0.05
HMGN4-201ENST00000377575 TTYH2Q9BSA4 534 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 ALKBH4Q9NXW9 302 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 BAIAP2L1Q9UHR4 511 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 MAPRE3Q9UPY8 281 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 WIF1Q9Y5W5 379 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 HCFC1P51610 2035 aa15.36■□□□□ 0.05
HMGN4-201ENST00000377575 PKDREJQ9NTG1 2253 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 PEX11AO75192 247 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 ERLIN1O75477 346 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 SNUPNO95149 360 aaKnown RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 FRKP42685 505 aaPredicted RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 PSMD4P55036 377 aaKnown RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 MANFP55145 182 aaKnown RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 CRYZQ08257 329 aaKnown RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 SF3B4Q15427 424 aaKnown RBP eCLIP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 CHI3L2Q15782 390 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 DECR1Q16698 335 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 ZNF385BQ569K4 471 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 NHSL2Q5HYW2 709 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 RTL6Q6ICC9 239 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 ZNF551Q7Z340 670 aaPredicted RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 ULK2Q8IYT8 1036 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 KIRREL3Q8IZU9 778 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 FNDC5Q8NAU1 212 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 FAM83FQ8NEG4 500 aaPredicted RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 OR4N2Q8NGD1 307 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 OR10Q1Q8NGQ4 319 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 PGM2Q96G03 612 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 LMF2Q9BU23 707 aaKnown RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 C3orf14Q9HBI5 128 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 ACSS1Q9NUB1 689 aaPredicted RBP15.35■□□□□ 0.05
HMGN4-201ENST00000377575 CBLCQ9ULV8 474 aa15.35■□□□□ 0.05
HMGN4-201ENST00000377575 ADGRG4Q8IZF6 3080 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 WDR91A4D1P6 747 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 FAM90A27PA6NNH2 459 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 SCAMP2O15127 329 aaKnown RBP15.34■□□□□ 0.05
HMGN4-201ENST00000377575 LYPLA1O75608 230 aaPredicted RBP15.34■□□□□ 0.05
HMGN4-201ENST00000377575 CBR3O75828 277 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 GLI4P10075 376 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 PRPS2P11908 318 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 EVI2BP34910 448 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 ABCE1P61221 599 aaKnown RBP15.34■□□□□ 0.05
HMGN4-201ENST00000377575 MAD2L1Q13257 205 aaPredicted RBP15.34■□□□□ 0.05
HMGN4-201ENST00000377575 VPS26BQ4G0F5 336 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 EIPR1Q53HC9 387 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 TNFAIP8L3Q5GJ75 292 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 SZRD1Q7Z422 152 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 GDF7Q7Z4P5 450 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 PLCZ1Q86YW0 608 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 MCEMP1Q8IX19 187 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 LILRB4Q8NHJ6 448 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 CEP70Q8NHQ1 597 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 RNF138Q8WVD3 245 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 TUBGCP3Q96CW5 907 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 MS4A4EQ96PG1 132 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 C1orf50Q9BV19 199 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 KCNK9Q9NPC2 374 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 EQTNQ9NQ60 294 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 SERHLQ9NQF3 203 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 GIMAP2Q9UG22 337 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 ABCG2Q9UNQ0 655 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 SLC6A5Q9Y345 797 aa15.34■□□□□ 0.05
HMGN4-201ENST00000377575 C2orf72A6NCS6 295 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 AHRRA9YTQ3 701 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 C19orf84I3L1E1 186 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 KCNH1O95259 989 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 ACTL6AO96019 429 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 SNRPB2P08579 225 aaKnown RBP15.33■□□□□ 0.04
HMGN4-201ENST00000377575 DHRS4L1P0CG22 281 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 CYP4B1P13584 511 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 GRK2P25098 689 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 ZFP36L2P47974 494 aaKnown RBP15.33■□□□□ 0.04
HMGN4-201ENST00000377575 WIPI1Q5MNZ9 446 aaPredicted RBP15.33■□□□□ 0.04
HMGN4-201ENST00000377575 C6orf136Q5SQH8 315 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 RIPPLY2Q5TAB7 128 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 VASNQ6EMK4 673 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 CCDC71Q8IV32 467 aaPredicted RBP15.33■□□□□ 0.04
HMGN4-201ENST00000377575 WDSUB1Q8N9V3 476 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 OR14L1PQ8NHC6 308 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 ABTB1Q969K4 478 aaPredicted RBP15.33■□□□□ 0.04
HMGN4-201ENST00000377575 C3orf30Q96M34 536 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 TIMP4Q99727 224 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms