RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LSMEM1Q8N8F7 131 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 ZNF675Q8TD23 568 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 RNF31Q96EP0 1072 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 FKBP14Q9NWM8 211 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 SCN3AQ9NY46 2000 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 ENTPD4Q9Y227 616 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 ZAR1LA6NP61 321 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 M0R3H8 397 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 POLR1CO15160 346 aaPredicted RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 ZNF780AO75290 641 aaPredicted RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 CHRM4P08173 479 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 STSP08842 583 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 DRD1P21728 446 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 HNRNPA2B1P22626 353 aaKnown RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 LTBRP36941 435 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 TPMTP51580 245 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 SNRPNP63162 240 aaKnown RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 PIN1Q13526 163 aaPredicted RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 ARMCX4Q5H9R4 360 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 FBXO42Q6P3S6 717 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 SLC30A2Q9BRI3 323 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 TIGARQ9NQ88 270 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 ENOPH1Q9UHY7 261 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 KCNE3Q9Y6H6 103 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 CEP290O15078 2479 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 OR6C70A6NIJ9 312 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 CSF2P04141 144 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 ADRA2AP08913 450 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 IL7P13232 177 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 UQCRC1P31930 480 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 CNR2P34972 360 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 TSFMP43897 325 aaKnown RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 MRPS21P82921 87 aaKnown RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 DAB2P98082 770 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 FUT5Q11128 374 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 EFR3AQ14156 821 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 PRRT3Q5FWE3 981 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 ARMC4Q5T2S8 1044 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 RPLP0P6Q8NHW5 317 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 SFXN5Q8TD22 340 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 CEP19Q96LK0 163 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 UCK2Q9BZX2 261 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 MS4A12Q9NXJ0 267 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 CCDC59Q9P031 241 aaKnown RBP13.12□□□□□ -0.31
MSH5-202ENST00000375740 REV1Q9UBZ9 1251 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 GRIP1Q9Y3R0 1128 aa13.12□□□□□ -0.31
MSH5-202ENST00000375740 FAM25AB3EWG3 89 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 FAM25CB3EWG5 89 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 FAM25GB3EWG6 89 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 RGS5O15539 181 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 OR10H3O60404 316 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
MSH5-202ENST00000375740 ZNF888P0CJ79 500 aaPredicted RBP13.11□□□□□ -0.31
MSH5-202ENST00000375740 MPIP34949 423 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ETV6P41212 452 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 CDC42P60953 191 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 TEKQ02763 1124 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 PXDC1Q5TGL8 231 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 DTX3Q8N9I9 347 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ZNF681Q96N22 645 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 BCL2L10Q9HD36 194 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ACAD8Q9UKU7 415 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 DSPPQ9NZW4 1301 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 FAAHO00519 579 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 EPPINO95925 133 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ADAP00813 363 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 FHP07954 510 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 RGS6P49758 472 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 SRP54P61011 504 aaKnown RBP13.11□□□□□ -0.31
MSH5-202ENST00000375740 RPS15AP62244 130 aaKnown RBP13.11□□□□□ -0.31
MSH5-202ENST00000375740 HOXC5Q00444 222 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 TGM3Q08188 693 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ZNF79Q15937 498 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ASPGQ86U10 573 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 STX19Q8N4C7 294 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 OR9A2Q8NGT5 310 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 BBS10Q8TAM1 723 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 GPR151Q8TDV0 419 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 ELP4Q96EB1 424 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 CCDC120Q96HB5 630 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 B3GNT4Q9C0J1 378 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 MGAT4BQ9UQ53 548 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 SZT2Q5T011 3432 aa13.11□□□□□ -0.31
MSH5-202ENST00000375740 PNMA8CA0A1B0GUJ8 204 aa13.1□□□□□ -0.31
MSH5-202ENST00000375740 A6NCN8 305 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms