RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ABHD17CQ6PCB6 329 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 BHLHB9Q6PI77 547 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 MARCH9Q86YJ5 346 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 CENPSQ8N2Z9 138 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 OR2L5Q8NG80 312 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 OR6C4Q8NGE1 309 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 RSPO3Q9BXY4 272 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 SYNDIG1Q9H7V2 258 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 SPHK1Q9NYA1 384 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 PCDHGA1Q9Y5H4 931 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 HEBP2Q9Y5Z4 205 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 GPC6Q9Y625 555 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 COLEC10Q9Y6Z7 277 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 HEATR5BQ9P2D3 2071 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 UNC13CQ8NB66 2214 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 PRAMEF27A3QJZ7 478 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 PRICKLE3O43900 615 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-202ENST00000374876 SEMA7AO75326 666 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 UGT2B17O75795 530 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 SULT1C4O75897 302 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 GP1BAP07359 652 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 ADORA3P0DMS8 318 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 OSMP13725 252 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 ATP5A1P25705 553 aaKnown RBP14.55□□□□□ -0.08
CCDC40-202ENST00000374876 CRISP3P54108 245 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 UGT2B15P54855 530 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 CCL7P80098 99 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 SEC23BQ15437 767 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 AMZ1Q400G9 498 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 NKAIN2Q5VXU1 208 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 OR4D11Q8NGI4 311 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 CHPT1Q8WUD6 406 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 JPH3Q8WXH2 748 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-202ENST00000374876 DHRS1Q96LJ7 313 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 SLC38A3Q99624 504 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 SPATA5L1Q9BVQ7 753 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 ALOXE3Q9BYJ1 711 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 PRDM7Q9NQW5 492 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 FBXO8Q9NRD0 319 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 FBXW2Q9UKT8 454 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 ENTPD4Q9Y227 616 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 ATG4BQ9Y4P1 393 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 ASB4Q9Y574 426 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 PMF1-BGLAPU3KQ54 211 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 DSPPQ9NZW4 1301 aa14.55□□□□□ -0.08
CCDC40-202ENST00000374876 A0A1W2PQM1 296 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 A0A1W2PR48 441 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 C4orf51C9J302 202 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 PGRMC2O15173 223 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 CNOT3O75175 753 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 RPLP0P05388 317 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 PEBP1P30086 187 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 TGFBR1P36897 503 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 TUBA1BP68363 451 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 ILKQ13418 452 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 GNA13Q14344 377 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 GPR19Q15760 415 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 TMEM64Q6YI46 380 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 USP53Q70EK8 1073 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 TUBA1AQ71U36 451 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SRFBP1Q8NEF9 429 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 OR6Q1Q8NGQ2 317 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 C9orf43Q8TAL5 461 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SNRNP27Q8WVK2 155 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 CRELD1Q96HD1 420 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 DCSTAMPQ9H295 470 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 CNOT2Q9NZN8 540 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 OSGIN1Q9UJX0 560 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 ATXN7L1Q9ULK2 861 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 ISM1B1AKI9 464 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 H3BN98 237 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SOX14O95416 240 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 PTHP01270 115 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 GADD45AP24522 165 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 CERS1P27544 350 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 PTGER1P34995 402 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 MAGEA8P43361 318 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 PPM1FP49593 454 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 ARFIP1P53367 373 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 OLR1P78380 273 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 INSM1Q01101 510 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 FOXC1Q12948 553 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 GPR18Q14330 331 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SLC46A3Q7Z3Q1 461 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 BTLAQ7Z6A9 289 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 LACC1Q8IV20 430 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 CCDC116Q8IYX3 515 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 BBS10Q8TAM1 723 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SFXN5Q8TD22 340 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 OTUB1Q96FW1 271 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 YIPF4Q9BSR8 244 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SLIRPQ9GZT3 109 aaKnown RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 KIR3DX1Q9H7L2 352 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 ZBTB20Q9HC78 741 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-202ENST00000374876 REV1Q9UBZ9 1251 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 ACAD8Q9UKU7 415 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SNX7Q9UNH6 387 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 SLC9A8Q9Y2E8 581 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 KLHL20Q9Y2M5 609 aa14.54□□□□□ -0.08
CCDC40-202ENST00000374876 PCDHGA4Q9Y5G9 962 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms